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S1-16-all-fractions_k255_5253937

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_5253937_1

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1..381
DNA (381bp) protein (127aa)
Transposase DDE domain protein n=1 Tax=uncultured bacterium CSL12 RepID=G4WVH3_9BACT
Transposase DDE domain protein {ECO:0000313|EMBL:AEQ20425.1}; TaxID=1091567 species="Bacteria; environmental samples.;" source="uncultured bacterium CSL12.;"
hypothetical protein
S1-16-all-fractions_k255_5253937_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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587..2842
DNA (2256bp) protein (752aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Primosomal protein N n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6V7_GEMAT
primosomal protein N
S1-16-all-fractions_k255_5253937_3
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3094..4233
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MZV0_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE03460.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
S1-16-all-fractions_k255_5253937_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4230..4934
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W0_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90364.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_5253937_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4939..5406
DNA (468bp) protein (156aa)
Fur family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W1_GEMAT
ferric-uptake regulator
Ferric-uptake regulator {ECO:0000313|EMBL:AHG90365.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_5253937_6
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5635..7338)
DNA (1704bp) protein (568aa)
Putative phosphodiesterase/nucleotide pyrophosphatase id=2883915 bin=GWC2_Pelobacter_58_13 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWC2_Pelobacteraceae_58_13_curated
S1-16-all-fractions_k255_5253937_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7406..8134
DNA (729bp) protein (243aa)
Cytochrome c-type biogenesis protein CcdA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W2_GEMAT
cytochrome c biogenesis protein transmembrane region
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:AHG90368.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_5253937_8
unknown

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8214..8354
DNA (141bp) protein (47aa)

This feature has no annotations

S1-16-all-fractions_k255_5253937_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8326..8688)
DNA (363bp) protein (121aa)
Two component transcriptional regulator, winged helix family n=4 Tax=Rhodobacter capsulatus RepID=D5AMK0_RHOCB
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:AHG90369.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_5253937_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8718..9527)
DNA (810bp) protein (270aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXZ9_9BACT
ATP-binding region ATPase domain protein
S1-16-all-fractions_k255_5253937_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9524..11377)
DNA (1854bp) protein (618aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W3_GEMAT
ABC transporter transmembrane region
ABC transporter transmembrane region {ECO:0000313|EMBL:AHG90371.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_5253937_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11486..12343
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W4_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90372.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_5253937_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12417..14171)
DNA (1755bp) protein (585aa)
Gamma-glutamyltranspeptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W5_GEMAT
gamma-glutamyltransferase
Gamma-glutamyltransferase {ECO:0000313|EMBL:AHG90374.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_5253937_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14523..15203)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W6_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37976.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S1-16-all-fractions_k255_5253937_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15349..16272
DNA (924bp) protein (308aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W7_GEMAT
N-acetylmuramic acid 6-phosphate etherase
S1-16-all-fractions_k255_5253937_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16269..17459
DNA (1191bp) protein (397aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W8_GEMAT
Anhydro-N-acetylmuramic acid kinase
S1-16-all-fractions_k255_5253937_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17456..18919
DNA (1464bp) protein (488aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Glycosidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W9_GEMAT
glycoside hydrolase family 3 domain protein
S1-16-all-fractions_k255_5253937_18
Deinococcus proteolyticus, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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18961..19422
DNA (462bp) protein (154aa)
Transposase IS4 family protein n=1 Tax=Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 / NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703) RepID=F0RR65_DEIPM
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ADY27774.1}; TaxID=693977 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 /; NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703).;"
S1-16-all-fractions_k255_5253937_19
unknown

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comp(19782..20054)
DNA (273bp) protein (91aa)

This feature has no annotations

S1-16-all-fractions_k255_5253937_20
unknown

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20283..20531
DNA (249bp) protein (83aa)

This feature has no annotations

S1-16-all-fractions_k255_5253937_21
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(20767..20937)
DNA (171bp) protein (57aa)
Arabinose efflux permease family protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C3S6_DESTA
arabinose efflux permease family protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Displaying 21 items

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