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S1-16-all-fractions_k255_5614916

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_5614916_1
unknown

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comp(3..326)
DNA (324bp) protein (108aa)

This feature has no annotations

S1-16-all-fractions_k255_5614916_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(326..724)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Mycobacterium colombiense CECT 3035 RepID=J4SGH8_9MYCO
blue (type 1) copper domain protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:AHG92676.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_5614916_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1002..2297)
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035F3BB8
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AHG92679.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_5614916_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2649..3209
DNA (561bp) protein (187aa)
RNA polymerase sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D563_9BACT
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92678.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_5614916_5
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3211..4140
DNA (930bp) protein (310aa)
Putative transmembrane anti-sigma factor n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDY5_XANP2
putative transmembrane anti-sigma factor
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:ABS66228.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S1-16-all-fractions_k255_5614916_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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4294..4917
DNA (624bp) protein (208aa)
tRNA modification GTPase n=1 Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) RepID=A4CKF1_ROBBH
tRNA modification GTPase
Tax=GWC2_Gemmatimonadetes_71_10_curated
S1-16-all-fractions_k255_5614916_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5084..5851)
DNA (768bp) protein (256aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C720_SPHTD
oxidoreductase FAD/NAD(P)-binding domain protein
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:AHG92265.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_5614916_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5841..6467)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0EAG0_9ACTN
oxidoreductase molybdopterin binding protein
Oxidoreductase molybdopterin binding protein {ECO:0000313|EMBL:AHG92266.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_5614916_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6645..7484
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACY1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40358.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S1-16-all-fractions_k255_5614916_10
Leptospira broomii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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comp(7547..8845)
DNA (1299bp) protein (433aa)
Sigma-70, region 4 n=1 Tax=Leptospira broomii serovar Hurstbridge str. 5399 RepID=T0F7J1_9LEPT
Sigma-70, region 4 {ECO:0000313|EMBL:EQA47065.1}; TaxID=1049789 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira broomii serovar Hurstbridge str. 5399.;"
sigma factor
S1-16-all-fractions_k255_5614916_11
Leptospira inadai, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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comp(8842..9186)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Leptospira broomii serovar Hurstbridge str. 5399 RepID=T0FFX4_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:EQA36767.1}; TaxID=1049790 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira inadai serovar Lyme str. 10.;"
hypothetical protein
S1-16-all-fractions_k255_5614916_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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9335..9643
DNA (309bp) protein (103aa)
Transcriptional regulator, ArsR family n=1 Tax=Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 / NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703) RepID=F0RN37_DEIPM
transcriptional regulator, ArsR family
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-16-all-fractions_k255_5614916_13
Setaria italica, Setaria, Poales, commelinids, Streptophyta, Viridiplantae

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9644..10489
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Setaria italica RepID=K3Z875_SETIT
Uncharacterized protein {ECO:0000313|EnsemblPlants:Si022745m}; TaxID=4555 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Paniceae; Setaria.;" source="Setaria italica (Foxtail millet) (Panicum italicum).;"
S1-16-all-fractions_k255_5614916_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10422..12062)
DNA (1641bp) protein (547aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7T4Y9_9DELT
PAS sensor protein
S1-16-all-fractions_k255_5614916_15
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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12169..12579
DNA (411bp) protein (137aa)
KaiB domain protein n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7T4S7_9DELT
KaiB domain protein {ECO:0000313|EMBL:EPR31636.1}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alkalitolerans DSM 16529.;"
KaiB domain-containing protein
S1-16-all-fractions_k255_5614916_16
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

12576..14147
DNA (1572bp) protein (524aa)
circadian clock protein KaiC (EC:2.7.11.1)
Putative circadian clock protein, KaiC {ECO:0000313|EMBL:ABU60179.1}; EC=2.7.11.1 {ECO:0000313|EMBL:ABU60179.1};; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
Putative circadian clock protein, KaiC n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NRI3_ROSCS
S1-16-all-fractions_k255_5614916_17
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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14251..14553
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B44575
multi-sensor signal transduction histidine kinase
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
Displaying 17 items

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