ggKbase home page

S1-16-all-fractions_k255_865715

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_865715_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

2..2521
DNA (2520bp) protein (840aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UTW7_PSEUP id=5223539 bin=16ft_combo_ws3_JS1 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Glycogen debranching enzyme
Tax=RBG_16_RIF_WS3X_71_46_curated
S1-16-all-fractions_k255_865715_2
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2551..3984)
DNA (1434bp) protein (478aa)
Beta-glucosidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC45_9GAMM
beta-glucosidase
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
S1-16-all-fractions_k255_865715_3
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4089..5228
DNA (1140bp) protein (380aa)
ABC transporter related protein n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DP02_9BACL
msmX; ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:EED08156.1}; TaxID=543302 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius LAA1.;"
S1-16-all-fractions_k255_865715_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5755..6297)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5I8_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89892.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_865715_5
unknown

Not on your lists

comp(6370..6813)
DNA (444bp) protein (148aa)

This feature has no annotations

S1-16-all-fractions_k255_865715_6
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6904..7644
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HPH0547 RepID=S3ASE6_9ACTO
winged helix family two component transcriptional regulator
Tax=RBG_13_Deltaproteobacteria_51_10_curated
S1-16-all-fractions_k255_865715_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7641..8411)
DNA (771bp) protein (257aa)
Transcriptional regulator, TetR family id=4734639 bin=GWA2_Methylomirabilis_73_35 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TetR family transcriptional regulator
Tax=GWA2_Rokubacteria_73_35_curated
S1-16-all-fractions_k255_865715_8
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8439..9338
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FC49_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB46047.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
S1-16-all-fractions_k255_865715_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9348..12431)
DNA (3084bp) protein (1028aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A762_GEMAT
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AHG90238.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_865715_10
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12637..13812)
DNA (1176bp) protein (392aa)
Peptidase M23 n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9SDW4_9CYAN
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:AFY68176.1}; Flags: Precursor;; TaxID=1173025 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Geitlerinema.;" source="Geitlerinema sp. PCC 7407.;"
S1-16-all-fractions_k255_865715_11
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14036..14899
DNA (864bp) protein (288aa)
membrane protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI000368676B
Uncharacterized protein {ECO:0000313|EMBL:KGR99309.1}; TaxID=1434929 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei ABCPW 111.;"
hypothetical protein
S1-16-all-fractions_k255_865715_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15009..15836)
DNA (828bp) protein (276aa)
Glutamine amidotransferase class-I family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A843_GEMAT
glutamine amidotransferase class-I family protein
Glutamine amidotransferase class-I family protein {ECO:0000313|EMBL:BAH38403.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S1-16-all-fractions_k255_865715_13
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(15933..17072)
DNA (1140bp) protein (380aa)
carboxylate-amine ligase (EC:6.3.-.-); K06048 carboxylate-amine ligase [EC:6.3.-.-] id=14631533 bin=bin9_gal15 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin9_gal15 organism_group=GAL15
carboxylate-amine ligase (EC:6.3.-.-)
Tax=CSP1_3_Armatimonadetes
S1-16-all-fractions_k255_865715_14
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(17201..18556)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A842_GEMAT
hypothetical protein
Tax=RBG_16_Armatimonadetes_67_12_curated
S1-16-all-fractions_k255_865715_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18577..19560)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A841_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87959.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_865715_16
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(19779..20498)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I4W7_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM00305.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
S1-16-all-fractions_k255_865715_17
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20546..20671)
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MRV0_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE07676.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
Displaying 17 items

View Taxonomy