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S1-16-all-fractions_k255_902803

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_902803_1
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..1225
DNA (1224bp) protein (408aa)
multi-sensor hybrid histidine kinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3A39
Chemotaxis protein methyltransferase CheR {ECO:0000313|EMBL:EYF02268.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
S1-16-all-fractions_k255_902803_2
unknown

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comp(1257..1379)
DNA (123bp) protein (41aa)

This feature has no annotations

S1-16-all-fractions_k255_902803_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(1562..3946)
DNA (2385bp) protein (795aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZBC1_TERRK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_902803_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

4349..5182
DNA (834bp) protein (278aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_902803_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(5202..5675)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003738E84
NLP/P60 protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_902803_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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5818..6351
DNA (534bp) protein (178aa)
putative HNH endonuclease (EC:3.1.-.-) id=12555741 bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative HNH endonuclease (EC:3.1.-.-)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_902803_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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6367..7395
DNA (1029bp) protein (343aa)
hypothetical protein id=12555742 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-16-all-fractions_k255_902803_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

7410..8927
DNA (1518bp) protein (506aa)
Putative permease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A971_GEMAT
putative permease
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-16-all-fractions_k255_902803_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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9188..12058
DNA (2871bp) protein (957aa)
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A id=12555743 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
excinuclease ABC subunit A
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_902803_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

12282..13193
DNA (912bp) protein (304aa)
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC:3.5.1.-); K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] id=12555744 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_902803_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(13207..14568)
DNA (1362bp) protein (454aa)
Radical SAM domain protein id=2892300 bin=GWC1_Spirochaetes_27_15 species=Denitrovibrio acetiphilus genus=Denitrovibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
radical SAM protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_902803_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(14575..14868)
DNA (294bp) protein (98aa)
id=12555745 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_902803_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(14871..15212)
DNA (342bp) protein (114aa)
anti-sigma-factor antagonist; K04749 anti-sigma B factor antagonist id=12555746 bin=CNBR_ACIDO species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
anti-sigma-factor antagonist
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_902803_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(15209..15778)
DNA (570bp) protein (190aa)
ECF subfamily RNA polymerase sigma-24 factor id=12555747 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
sigma-70 family RNA polymerase sigma factor
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-16-all-fractions_k255_902803_15
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

16003..17244
DNA (1242bp) protein (414aa)
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] id=12555748 bin=CNBR_ACIDO species=Roseomonas sp. B5 genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
diaminopimelate decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-16-all-fractions_k255_902803_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

17261..17854
DNA (594bp) protein (198aa)
thymidylate kinase id=12555749 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
thymidylate kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-16-all-fractions_k255_902803_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(17981..18763)
DNA (783bp) protein (261aa)
comF; competence protein F id=12555750 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphoribosyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying 17 items

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