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S1-16-all-fractions_k255_1522609

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_1522609_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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3..887
DNA (885bp) protein (295aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S1-16-all-fractions_k255_1522609_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

1079..3106
DNA (2028bp) protein (676aa)
ABC transporter ATPase; K06158 ATP-binding cassette, subfamily F, member 3 id=12555764 bin=CNBR_ACIDO species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-16-all-fractions_k255_1522609_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

3252..4487
DNA (1236bp) protein (412aa)
signal transduction histidine kinase, nitrogen specific, NtrB id=12555763 bin=CNBR_ACIDO species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
gnfL; nitrogen fixation master sensor histidine kinase, PAS domain-containing
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_1522609_4
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

4504..5919
DNA (1416bp) protein (472aa)
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains id=12555762 bin=CNBR_ACIDO species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-16-all-fractions_k255_1522609_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(5946..6998)
DNA (1053bp) protein (351aa)
xerC; tyrosine recombinase XerC id=12555761 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
tyrosine recombinase XerC
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S1-16-all-fractions_k255_1522609_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(7043..8533)
DNA (1491bp) protein (497aa)
hypothetical protein (EC:2.1.1.74); K04094 methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] id=12555760 bin=CNBR_ACIDO species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
tRNA (uracil-5-)-methyltransferase Gid (EC:2.1.1.74)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_1522609_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(8664..11396)
DNA (2733bp) protein (911aa)
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9S7F9_9CYAN
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-16-all-fractions_k255_1522609_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(11418..12488)
DNA (1071bp) protein (357aa)
smf; protein Smf; K04096 DNA processing protein id=12555758 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA protecting protein DprA
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S1-16-all-fractions_k255_1522609_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

12781..13134
DNA (354bp) protein (118aa)
TPR Domain containing protein id=12555757 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S1-16-all-fractions_k255_1522609_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

13103..14095
DNA (993bp) protein (331aa)
id=12555756 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_1522609_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


14188..14547
DNA (360bp) protein (120aa)
rplU; 50S ribosomal protein L21 id=12555755 bin=CNBR_ACIDO species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rplU; 50S ribosomal protein L21
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_1522609_12
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

14747..14968
DNA (222bp) protein (74aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CBE2_9PLAN
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:EDL58037.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
Type I phosphodiesterase / nucleotide pyrophosphatase
Displaying 12 items

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