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S1-16-all-fractions_k255_5439320

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_5439320_1

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1..744
DNA (744bp) protein (248aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM95766.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein id=24443351 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
S1-16-all-fractions_k255_5439320_2
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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923..1864
DNA (942bp) protein (314aa)
PDZ/DHR/GLGF domain protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5URF8_ROSS1
PDZ/DHR/GLGF domain-containing protein
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:ABQ89211.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
S1-16-all-fractions_k255_5439320_3
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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1868..2485
DNA (618bp) protein (206aa)
Response regulator receiver protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5URG0_ROSS1
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABQ89213.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
S1-16-all-fractions_k255_5439320_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2681..3649
DNA (969bp) protein (323aa)
HtrA2 peptidase (EC:3.4.21.108)
2-alkenal reductase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJY8_9BACT id=5224300 bin=16ft_combo_ws3_JS1 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Trypsin-like serine protease with C-terminal PDZ domain {ECO:0000313|EMBL:CDM64882.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
S1-16-all-fractions_k255_5439320_5
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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comp(3668..6784)
DNA (3117bp) protein (1039aa)
Phosphoesterase family n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDU9_CHLTF
phosphoesterase family
Phosphoesterase family {ECO:0000313|EMBL:AEP12957.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
S1-16-all-fractions_k255_5439320_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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6854..9100
DNA (2247bp) protein (749aa)
TonB-dependent receptor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INW6_KORVE
TonB-dependent receptor
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S1-16-all-fractions_k255_5439320_7
unknown

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comp(9311..9724)
DNA (414bp) protein (138aa)

This feature has no annotations

S1-16-all-fractions_k255_5439320_8
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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9936..11972
DNA (2037bp) protein (679aa)
TonB-dependent receptor id=3018610 bin=GWF2_Syntrophobacterales_56_9 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
ligand-gated porin
Tax=RBG_13_Nitrospirae_43_8_curated
S1-16-all-fractions_k255_5439320_9
RLO_PLX_64_10, Bacteria

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11960..12574
DNA (615bp) protein (205aa)
Uncharacterized protein id=3148287 bin=GWC2_Syntrophobacterales_56_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
S1-16-all-fractions_k255_5439320_10
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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12571..14427
DNA (1857bp) protein (619aa)
Putative Histidine kinase id=4165963 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pleD; diguanylate cyclase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
S1-16-all-fractions_k255_5439320_11
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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14565..15674
DNA (1110bp) protein (370aa)
Uncharacterized protein id=12556909 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
S1-16-all-fractions_k255_5439320_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

15700..16740
DNA (1041bp) protein (347aa)
ABC transporter, periplasmic phosphate binding protein id=12556908 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter periplasmic phosphate binding protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S1-16-all-fractions_k255_5439320_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

16748..17701
DNA (954bp) protein (318aa)
phosphate ABC transporter inner membrane protein; K02037 phosphate transport system permease protein id=12556907 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphate ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-16-all-fractions_k255_5439320_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

17698..18549
DNA (852bp) protein (284aa)
pstA; phosphate ABC transporter permease PstA; K02038 phosphate transport system permease protein id=12556906 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphate ABC transporter, permease protein PstA
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-16-all-fractions_k255_5439320_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

18635..19252
DNA (618bp) protein (206aa)
hypothetical protein; K07220 hypothetical protein id=12555366 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_5439320_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

19259..20266
DNA (1008bp) protein (336aa)
phosphate transporter; K03306 inorganic phosphate transporter, PiT family id=12555365 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphate transporter
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_5439320_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(20270..22051)
DNA (1782bp) protein (594aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.3.-); K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] id=12555364 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
multi-sensor signal transduction histidine kinase (EC:2.7.13.3)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S1-16-all-fractions_k255_5439320_18
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(22048..22761)
DNA (714bp) protein (238aa)
putative phosphate regulon transcriptional regulatory protein PhoB; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP id=12555363 bin=CNBR_ACIDO species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative phosphate regulon transcriptional regulatory protein PhoB
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-16-all-fractions_k255_5439320_19
unknown

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23060..23158
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying 19 items

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