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S1-16-all-fractions_k255_5944333

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_5944333_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(1..1392)
DNA (1392bp) protein (464aa)
peptidase M28 id=14430671 bin=bin3_NC10 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
peptidase M28
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-16-all-fractions_k255_5944333_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1542..2387)
DNA (846bp) protein (282aa)
malate dehydrogenase (EC:1.1.1.37); K00024 malate dehydrogenase [EC:1.1.1.37] id=12557191 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
malate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-16-all-fractions_k255_5944333_3
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

2466..3188
DNA (723bp) protein (241aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023X9_SOLUE id=5223348 bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-16-all-fractions_k255_5944333_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3192..4157)
DNA (966bp) protein (322aa)
Threonine dehydratase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5U5_CONWI
threonine dehydratase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_5944333_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

4457..5110
DNA (654bp) protein (218aa)
beta-lactamase id=12557189 bin=CNBR_ACIDO species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
beta-lactamase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_5944333_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5114..5416)
DNA (303bp) protein (101aa)
ABC transporter ATP-binding protein id=12557185 bin=CNBR_ACIDO species=Nocardia farcinica genus=Nocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
FHA domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_5944333_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5585..6778
DNA (1194bp) protein (398aa)
secretion protein HlyD; K02005 HlyD family secretion protein id=12554548 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:ABF42532.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
S1-16-all-fractions_k255_5944333_8
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6782..8077
DNA (1296bp) protein (432aa)
hypothetical protein; K02004 putative ABC transport system permease protein id=12554549 bin=CNBR_ACIDO species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV82345.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
S1-16-all-fractions_k255_5944333_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8079..9416
DNA (1338bp) protein (446aa)
ABC efflux pump, inner membrane subunit id=12554550 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
efflux ABC transporter inner membrane protein
ABC efflux pump, inner membrane subunit {ECO:0000313|EMBL:ABF43631.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
S1-16-all-fractions_k255_5944333_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(9451..11085)
DNA (1635bp) protein (545aa)
lipoprotein; K06889 id=12557184 bin=CNBR_ACIDO species=Asticcacaulis sp. AC466 genus=Asticcacaulis taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_5944333_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

11354..12400
DNA (1047bp) protein (349aa)
Glycine cleavage system T protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N2G2_CORCM
gcvT1; glycine cleavage system T protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_5944333_12
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12599..12832
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000381BA54
transcriptional regulator of the Arc/MetJ class
Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
S1-16-all-fractions_k255_5944333_13
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

Not on your lists

12832..13191
DNA (360bp) protein (120aa)
PilT protein domain-containing protein; K07062 id=24490322 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
PilT-like protein protein
Tax=RBG_13_Aminicenantes_62_12_curated
S1-16-all-fractions_k255_5944333_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(13209..13637)
DNA (429bp) protein (143aa)
mutT; mutator protein MutT (EC:3.6.1.-); K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] id=12557182 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-16-all-fractions_k255_5944333_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(13595..14311)
DNA (717bp) protein (239aa)
mutY; A/G-specific adenine glycosylase (EC:3.2.2.-); K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] id=12557181 bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
mutY; A/G-specific adenine glycosylase (EC:3.2.2.-)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_5944333_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

14609..15148
DNA (540bp) protein (180aa)
ATP/cobalamin adenosyltransferase id=12557180 bin=CNBR_ACIDO species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ATP--cobalamin adenosyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_5944333_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

15148..16212
DNA (1065bp) protein (355aa)
squalene synthase (EC:2.5.1.32) id=12557179 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
squalene synthase (EC:2.5.1.32)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_5944333_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

16316..17137
DNA (822bp) protein (274aa)
squalene/phytoene synthase id=12557178 bin=CNBR_ACIDO species=Thauera linaloolentis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
squalene/phytoene synthase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_5944333_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

17124..17741
DNA (618bp) protein (206aa)
squalene-associated FAD-dependent desaturase (EC:1.14.99.30) id=12557177 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
squalene-associated FAD-dependent desaturase (EC:1.14.99.30)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying 19 items

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