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S1-16-all-fractions_k255_6101882

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_6101882_1
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..937)
DNA (936bp) protein (312aa)
Truncated chemotaxis protein CheA n=1 Tax=Beggiatoa sp. PS RepID=A7BY40_9GAMM
Truncated chemotaxis protein CheA {ECO:0000313|EMBL:EDN68544.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
CheA signal transduction histidine kinase
S1-16-all-fractions_k255_6101882_2
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(930..1346)
DNA (417bp) protein (139aa)
Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TLI3_9CYAN
response regulator containing a CheY-like receiver domain and a GGDEF domain
Response regulator containing a CheY-like receiver domain and a GGDEF domain {ECO:0000313|EMBL:AFY83727.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
S1-16-all-fractions_k255_6101882_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1453..4905)
DNA (3453bp) protein (1151aa)
two-component hybrid sensor and regulator (EC:2.7.3.-)
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:CAN90870.1}; EC=2.7.3.- {ECO:0000313|EMBL:CAN90870.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3A67
S1-16-all-fractions_k255_6101882_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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5277..8204
DNA (2928bp) protein (976aa)
TonB-dependent receptor, plug id=12557849 bin=CNBR_ACIDO species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
OmpA-like protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_6101882_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8251..8733
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACQ6_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40283.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S1-16-all-fractions_k255_6101882_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8773..9147)
DNA (375bp) protein (125aa)
Two-component system, cell cycle response regulator n=1 Tax=Azoarcus sp. KH32C RepID=H0PYG2_9RHOO
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:AHG93697.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_6101882_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(9157..10914)
DNA (1758bp) protein (586aa)
two-component sensor/regulator (EC:2.7.3.-)
Uncharacterized protein n=1 Tax=Pseudomonas viridiflava UASWS0038 RepID=K6BJ79_PSEVI
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-16-all-fractions_k255_6101882_8

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11397..11888
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KZD1_SIMAS
Glyoxalase-like domain protein {ECO:0000313|EMBL:AIA17044.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
S1-16-all-fractions_k255_6101882_9
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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12227..13483
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82PX4_STRAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAC68458.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;"
S1-16-all-fractions_k255_6101882_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(13820..14056)
DNA (237bp) protein (79aa)
surE; stationary phase survival protein SurE; K03787 5'-nucleotidase [EC:3.1.3.5] id=12556185 bin=CNBR_ACIDO species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
surE; 5'-nucleotidase surE (Nucleoside 5'-monophosphate phosphohydrolase)(survival protein, protein damage control) (EC:3.1.3.5)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Displaying 10 items

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