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S1-16-all-fractions_k255_6276820

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_6276820_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..486)
DNA (486bp) protein (162aa)
histone deacetylase id=12555172 bin=CNBR_ACIDO species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
histone deacetylase family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-16-all-fractions_k255_6276820_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(561..1244)
DNA (684bp) protein (228aa)
hypothetical protein; K09778 hypothetical protein id=12555169 bin=CNBR_ACIDO species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-16-all-fractions_k255_6276820_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(1241..2896)
DNA (1656bp) protein (552aa)
electron-transferring-flavoprotein dehydrogenase; K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] id=12556274 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
electron-transferring-flavoprotein dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_6276820_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(2903..3874)
DNA (972bp) protein (324aa)
electron transfer flavoprotein, alpha subunit; K03522 electron transfer flavoprotein alpha subunit id=12556273 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
electron transfer flavoprotein subunit alpha
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-16-all-fractions_k255_6276820_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3871..4632)
DNA (762bp) protein (254aa)
Electron transfer flavoprotein beta-subunit n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029W6_SOLUE
electron transfer flavoprotein subunit beta
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_6276820_6
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(4629..5882)
DNA (1254bp) protein (418aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] id=12555168 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
3-oxoacyl-ACP synthase (EC:2.3.1.41)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-16-all-fractions_k255_6276820_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5968..6210)
DNA (243bp) protein (81aa)
acpP; acyl carrier protein; K02078 acyl carrier protein id=12555167 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
acpP; acyl carrier protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_6276820_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(6219..6959)
DNA (741bp) protein (247aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] id=12555166 bin=CNBR_ACIDO species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-16-all-fractions_k255_6276820_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(7015..7950)
DNA (936bp) protein (312aa)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHS7_KORVE
ACP S-malonyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_6276820_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(7947..8933)
DNA (987bp) protein (329aa)
plsX; fatty acid/phospholipid synthesis protein, methyltransferase domain id=12555165 bin=CNBR_ACIDO species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
plsX; fatty acid/phospholipid synthesis protein, methyltransferase domain
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_6276820_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


comp(9055..9237)
DNA (183bp) protein (61aa)
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 id=12555164 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpmF; 50S ribosomal protein L32
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_6276820_12
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(9230..9766)
DNA (537bp) protein (179aa)
hypothetical protein; K07040 uncharacterized protein id=12555163 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-16-all-fractions_k255_6276820_13
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(9913..10959)
DNA (1047bp) protein (349aa)
deoxyguanosinetriphosphate triphosphohydrolase; K01129 dGTPase [EC:3.1.5.1] id=12555162 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
deoxyguanosinetriphosphate triphosphohydrolase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-16-all-fractions_k255_6276820_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(10967..12121)
DNA (1155bp) protein (385aa)
phosphopentomutase (EC:5.4.2.7); K01839 phosphopentomutase [EC:5.4.2.7] id=12555161 bin=CNBR_ACIDO species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphopentomutase (EC:5.4.2.7)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_6276820_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(12171..12431)
DNA (261bp) protein (87aa)
RNA-binding protein Hfq n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029X0_SOLUE
RNA-binding protein Hfq
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_6276820_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12431..13414)
DNA (984bp) protein (328aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] id=12555160 bin=CNBR_ACIDO species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-16-all-fractions_k255_6276820_17
unknown

Not on your lists

comp(13428..13517)
DNA (90bp) protein (30aa)

This feature has no annotations

S1-16-all-fractions_k255_6276820_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(13514..14500)
DNA (987bp) protein (329aa)
hypothetical protein id=12555159 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_6276820_19
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(14598..15347)
DNA (750bp) protein (250aa)
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase ubiE; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] id=12555158 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase UbiE
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-16-all-fractions_k255_6276820_20
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(15373..16251)
DNA (879bp) protein (293aa)
putative 4-hydroxybenzoate polyprenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] id=12555156 bin=CNBR_ACIDO species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
4-hydroxybenzoate polyprenyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-16-all-fractions_k255_6276820_21
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(16251..17498)
DNA (1248bp) protein (416aa)
S-adenosylhomocysteine deaminase (EC:3.5.4.28) id=12555155 bin=CNBR_ACIDO species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
amidohydrolase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-16-all-fractions_k255_6276820_22
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(17489..18805)
DNA (1317bp) protein (439aa)
radical SAM protein id=12555154 bin=CNBR_ACIDO species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
radical SAM protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-16-all-fractions_k255_6276820_23
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(18810..19658)
DNA (849bp) protein (283aa)
hypothetical protein; K07081 id=12555153 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-16-all-fractions_k255_6276820_24
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(19658..20557)
DNA (900bp) protein (300aa)
radical SAM domain-containing protein id=12555152 bin=CNBR_ACIDO species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
radical SAM protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S1-16-all-fractions_k255_6276820_25
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(20586..21542)
DNA (957bp) protein (319aa)
putative dehydrogenase-like protein id=12555151 bin=CNBR_ACIDO species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-16-all-fractions_k255_6276820_26
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(21539..22360)
DNA (822bp) protein (274aa)
hypothetical protein; K09949 hypothetical protein id=12555150 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-16-all-fractions_k255_6276820_27
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(22424..23674)
DNA (1251bp) protein (417aa)
acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] id=12555149 bin=CNBR_ACIDO species=Ceratitis capitata genus=Ceratitis taxon_order=Diptera taxon_class=Insecta phylum=Arthropoda tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lpxA-1; UDP-N-acetylglucosamine acyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-16-all-fractions_k255_6276820_28
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(23816..24565)
DNA (750bp) protein (250aa)
outer membrane protein id=12555148 bin=CNBR_ACIDO species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
outer membrane chaperone Skp
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-16-all-fractions_k255_6276820_29
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(24658..27375)
DNA (2718bp) protein (906aa)
surface antigen (D15) id=12555146 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
surface antigen
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-16-all-fractions_k255_6276820_30
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(27465..29900)
DNA (2436bp) protein (812aa)
ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC id=12555145 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
clpC; ATP-dependent Clp protease, ATP-binding subunit ClpC
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Displaying items 1-30 of 38 in total

View Taxonomy