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S1-16-all-fractions_k255_6319001

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_6319001_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(1..453)
DNA (453bp) protein (151aa)
peptidyl-prolyl cis-trans isomerase id=12556596 bin=CNBR_ACIDO species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_6319001_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

584..1222
DNA (639bp) protein (213aa)
Deoxynucleoside kinase family protein id=12556597 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Deoxynucleoside kinase family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-16-all-fractions_k255_6319001_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

1283..2182
DNA (900bp) protein (300aa)
accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] id=12556598 bin=CNBR_ACIDO species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
acetyl-CoA carboxylase, carboxyl transferase subunit beta
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-16-all-fractions_k255_6319001_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2179..3483
DNA (1305bp) protein (435aa)
folC; bifunctional folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.12 6.3.2.17)
tetrahydrofolylpolyglutamate synthase/dihydrofolate synthase id=12556599 bin=CNBR_ACIDO species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-16-all-fractions_k255_6319001_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3628..5919
DNA (2292bp) protein (764aa)
organic solvent tolerance protein OstA-like; K04744 LPS-assembly protein id=12556600 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-16-all-fractions_k255_6319001_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

5945..6961
DNA (1017bp) protein (339aa)
dTDP-glucose 4,6-dehydratase id=3234516 bin=GWA2_Methylomirabilis_73_35 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dTDP-glucose 4,6-dehydratase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-16-all-fractions_k255_6319001_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

6961..7926
DNA (966bp) protein (322aa)
NAD-dependent epimerase/dehydratase id=12556601 bin=CNBR_ACIDO species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
NAD-dependent epimerase/dehydratase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-16-all-fractions_k255_6319001_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

8091..9122
DNA (1032bp) protein (344aa)
radical SAM protein id=12555832 bin=CNBR_ACIDO species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
radical SAM protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_6319001_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(9195..11504)
DNA (2310bp) protein (770aa)
ATPases with chaperone activity, ATP-binding subunit id=2429558 bin=GWC2_Deltaproteobacteria_55_46 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
chaperone activity ATPase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-16-all-fractions_k255_6319001_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(11698..12543)
DNA (846bp) protein (282aa)
peptidase M48 Ste24p; K03799 heat shock protein HtpX [EC:3.4.24.-] id=12556602 bin=CNBR_ACIDO species=Desulfovibrio sp. U5L genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
protease htpX
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_6319001_11
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

12786..13274
DNA (489bp) protein (163aa)
uncharacterized LOC100208015 id=12556603 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-16-all-fractions_k255_6319001_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(13297..15027)
DNA (1731bp) protein (577aa)
thiC; thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC id=12556604 bin=CNBR_ACIDO species=Actinomadura flavalba genus=Actinomadura taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
thiamine biosynthesis protein ThiC
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_6319001_13
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(15056..15664)
DNA (609bp) protein (203aa)
hypothetical protein id=14632936 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=CSP1_3_Armatimonadetes
S1-16-all-fractions_k255_6319001_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(15686..16858)
DNA (1173bp) protein (391aa)
SAM-dependent methyltransferase; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] id=12556607 bin=CNBR_ACIDO species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
S-adenosylmethionine-dependent methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_6319001_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

17042..17500
DNA (459bp) protein (153aa)
rpiB; ribose-5-phosphate isomerase B (EC:5.3.1.6)
Putative sugar phosphate epimerase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z734_9ACTN
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_6319001_16
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

17542..18822
DNA (1281bp) protein (427aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] id=12556609 bin=CNBR_ACIDO species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glyA; serine hydroxymethyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-16-all-fractions_k255_6319001_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

18854..20896
DNA (2043bp) protein (681aa)
Rad3-related DNA helicase (EC:3.6.1.-); K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12] id=12556610 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
helicase c2
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_6319001_18
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

21003..21989
DNA (987bp) protein (329aa)
TPR repeat-containing protein id=12556611 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidase S1 and S6 chymotrypsin/Hap
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-16-all-fractions_k255_6319001_19
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

21989..22714
DNA (726bp) protein (242aa)
PLP dependent enzymes class III-like protein; K06997 id=12556612 bin=CNBR_ACIDO species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
pyridoxal phosphate enzyme, YggS family
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-16-all-fractions_k255_6319001_20
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

22711..23163
DNA (453bp) protein (151aa)
Cell-division initiation protein DivIVA n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08N06_STIAD
divIVA; cell-division initiation protein DivIVA
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_6319001_21
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

23328..23585
DNA (258bp) protein (86aa)
hypothetical protein; K09131 hypothetical protein id=12556613 bin=CNBR_ACIDO species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_6319001_22
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

23661..24929
DNA (1269bp) protein (423aa)
imidazolonepropionase; K01468 imidazolonepropionase [EC:3.5.2.7] id=24411077 bin=RBG_19FT_COMBO_GAL15_69_19 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
protein HutI
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_6319001_23
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

24974..25600
DNA (627bp) protein (209aa)
fcha; methenyltetrahydrofolate cyclohydrolase Fcha (EC:3.5.4.9) id=24411076 bin=RBG_19FT_COMBO_GAL15_69_19 species=Bacteroides xylanisolvens genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
formiminotransferase-cyclodeaminase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-16-all-fractions_k255_6319001_24
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(25624..26322)
DNA (699bp) protein (233aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] id=12556615 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lepB; signal peptidase I
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_6319001_25
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(26322..28124)
DNA (1803bp) protein (601aa)
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA id=12556616 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lepA; GTP-binding protein LepA
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_6319001_26
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(28244..28765)
DNA (522bp) protein (174aa)
2-methylcitrate synthase/citrate synthase II; K01647 citrate synthase [EC:2.3.3.1] id=12556617 bin=CNBR_ACIDO species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
2-methylcitrate synthase/citrate synthase II
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying 26 items

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