ggKbase home page

S1-18-all-fractions_k255_1683727

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_1683727_1
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23..880
DNA (858bp) protein (286aa)
spk; Two-component serine/threonine-protein kinase PK-1 with PASTA sensors (EC:2.7.11.1)
penicillin-binding protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6BBFD
Protein kinase {ECO:0000313|EMBL:ABS04696.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
S1-18-all-fractions_k255_1683727_2
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

965..1996
DNA (1032bp) protein (344aa)
3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:ACZ85717.1}; EC=2.5.1.54 {ECO:0000313|EMBL:ACZ85717.1};; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B48238
S1-18-all-fractions_k255_1683727_3
unknown

Not on your lists

2043..2249
DNA (207bp) protein (69aa)

This feature has no annotations

S1-18-all-fractions_k255_1683727_4
Streptomyces sp. Tu 6176, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2351..2713
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00035F0F8C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYT81933.1}; TaxID=1470557 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu 6176.;"
S1-18-all-fractions_k255_1683727_5
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2745..3677)
DNA (933bp) protein (311aa)
Sterol desaturase n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1FUW6_9PSEU
C-5 sterol desaturase {ECO:0000313|EMBL:KDN17050.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
sterol desaturase
S1-18-all-fractions_k255_1683727_6
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3749..4786)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=2 Tax=Corynebacterium equii RepID=E4WBE6_RHOE1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH46248.1}; TaxID=685727 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi (strain 103S) (Corynebacterium equi).;"
S1-18-all-fractions_k255_1683727_7
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4797..5381)
DNA (585bp) protein (195aa)
Probable RNA 2'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00299}; EC=2.7.1.- {ECO:0000256|HAMAP-Rule:MF_00299};; TaxID=1214242 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinus Tu 365.;"
Probable RNA 2'-phosphotransferase n=1 Tax=Streptomyces collinus Tu 365 RepID=S5VQG3_STRCU
phosphotransferase
S1-18-all-fractions_k255_1683727_8
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5467..5877)
DNA (411bp) protein (137aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q2T4_KRIFD
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADB30265.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
S1-18-all-fractions_k255_1683727_9
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5911..6699)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNS335 RepID=UPI0003726DE7
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase {ECO:0000313|EMBL:ETK33738.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
Hypothetical protein
S1-18-all-fractions_k255_1683727_10
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6862..7890)
DNA (1029bp) protein (343aa)
threonine aldolase (EC:4.1.2.5)
threonine aldolase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6D9B3
Threonine aldolase {ECO:0000313|EMBL:KGN41060.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
S1-18-all-fractions_k255_1683727_11
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7883..9286)
DNA (1404bp) protein (468aa)
aroF; 3-deoxy-7-phosphoheptulonate synthase (Phospho-2-dehydro-3-deoxyheptonate aldolase) (DAHP synthetase class II) (EC:2.5.1.54)
phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B2E85E
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:KGH47341.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
S1-18-all-fractions_k255_1683727_12
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9345..10370)
DNA (1026bp) protein (342aa)
6-phosphofructokinase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B70077
phosphofructokinase
Phosphofructokinase {ECO:0000313|EMBL:ADL48045.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
S1-18-all-fractions_k255_1683727_13
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10446..10955)
DNA (510bp) protein (170aa)
3'-5' exoribonuclease {ECO:0000256|HAMAP-Rule:MF_00977}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00977};; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00036C5C7A
hypothetical protein
S1-18-all-fractions_k255_1683727_14
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10965..11738)
DNA (774bp) protein (258aa)
putative 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51)
Uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TKA9_9MICO
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:KGN29007.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
S1-18-all-fractions_k255_1683727_15
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11909..12688
DNA (780bp) protein (260aa)
carboxylesterase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B4CC4B
Uncharacterized protein {ECO:0000313|EMBL:EFQ83412.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
esterase
S1-18-all-fractions_k255_1683727_16
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12690..13385
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B4C3DA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG03038.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
S1-18-all-fractions_k255_1683727_17
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13485..13721
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B47E91
Uncharacterized protein {ECO:0000313|EMBL:EXG80888.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
S1-18-all-fractions_k255_1683727_18
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13749..14300
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B56273
Uridine kinase {ECO:0000313|EMBL:KGM09476.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
hypothetical protein
S1-18-all-fractions_k255_1683727_19
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14384..16519
DNA (2136bp) protein (712aa)
Oligopeptidase B (EC:3.4.21.83)
Oligopeptidase B {ECO:0000313|EMBL:ADB32472.1}; EC=3.4.21.83 {ECO:0000313|EMBL:ADB32472.1};; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
protease n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B43E48
S1-18-all-fractions_k255_1683727_20
unknown

Not on your lists

comp(16581..17228)
DNA (648bp) protein (216aa)

This feature has no annotations

S1-18-all-fractions_k255_1683727_21
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17285..18010)
DNA (726bp) protein (242aa)
endonuclease/exonuclease/phosphatase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B656C5
endonuclease/exonuclease/phosphatase
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ABK52753.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
S1-18-all-fractions_k255_1683727_22
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18044..18769)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNS615 RepID=UPI00037A5D48
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIA03226.1}; TaxID=68570 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus.;"
S1-18-all-fractions_k255_1683727_23
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18766..19968)
DNA (1203bp) protein (401aa)
cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase {ECO:0000313|EMBL:CCH90778.1}; EC=2.8.1.7 {ECO:0000313|EMBL:CCH90778.1};; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
Cysteine desulfurase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F565_MODMB
S1-18-all-fractions_k255_1683727_24
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20052..20810
DNA (759bp) protein (253aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EZM3_MODMB
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KJK46563.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
short-chain dehydrogenase/reductase SDR
S1-18-all-fractions_k255_1683727_25
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20970..21875)
DNA (906bp) protein (302aa)
Peptidase alpha-lytic pro domain protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q1F6_KRIFD
peptidase alpha-lytic pro domain-containing protein
Peptidase alpha-lytic pro domain protein {ECO:0000313|EMBL:ADB30144.1}; Flags: Precursor;; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
S1-18-all-fractions_k255_1683727_26
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22223..22945)
DNA (723bp) protein (241aa)
Peptidase alpha-lytic pro domain protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q1F6_KRIFD
peptidase alpha-lytic pro domain-containing protein
Peptidase alpha-lytic pro domain protein {ECO:0000313|EMBL:ADB30144.1}; Flags: Precursor;; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
S1-18-all-fractions_k255_1683727_27
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23089..23520)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PZL1_KRIFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB35577.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
S1-18-all-fractions_k255_1683727_28
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23673..25118
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PPD1_KRIFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB34727.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
S1-18-all-fractions_k255_1683727_29
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25239..25514)
DNA (276bp) protein (92aa)
glucokinase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6A45B
Glucokinase {ECO:0000313|EMBL:KGM01177.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
glk2; putative glucokinase
Displaying 29 items

View Taxonomy