ggKbase home page

S1-18-all-fractions_k255_4089452

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_4089452_1
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..1688
DNA (1686bp) protein (562aa)
glutamate synthase (ferredoxin) (EC:1.4.7.1)
Glutamate synthase (Ferredoxin) {ECO:0000313|EMBL:ADB75818.1}; EC=1.4.7.1 {ECO:0000313|EMBL:ADB75818.1};; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
glutamate synthase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B48F78
S1-18-all-fractions_k255_4089452_2
Rhodococcus sp. BCP1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1789..3219
DNA (1431bp) protein (477aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=931223 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. BCP1.;"
pyruvate kinase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6723C
Pyruvate kinase
S1-18-all-fractions_k255_4089452_3
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3233..4132
DNA (900bp) protein (300aa)
acyl-CoA thioesterase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6C424
acyl-CoA thioesterase II
Acyl-CoA thioesterase II {ECO:0000313|EMBL:ACV79403.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
S1-18-all-fractions_k255_4089452_4
Xenorhabdus bovienii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4217..5215)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI00035C32AD
Uncharacterized protein {ECO:0000313|EMBL:CDG97389.1}; TaxID=1398201 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus bovienii str. puntauvense.;"
putative Stearoyl-CoA 9-desaturase
S1-18-all-fractions_k255_4089452_5
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5448..6905)
DNA (1458bp) protein (486aa)
pyridoxal-dependent amino acid decarboxylase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B447F7
pyridoxal-dependent decarboxylase
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:AJC60567.1}; TaxID=1262452 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
S1-18-all-fractions_k255_4089452_6
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7118..7723
DNA (606bp) protein (202aa)
transcriptional regulator n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6A50B
two-component system response regulator
Transcriptional regulator {ECO:0000313|EMBL:EQD83429.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
S1-18-all-fractions_k255_4089452_7
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8013..9227
DNA (1215bp) protein (405aa)
ABC transporter substrate-binding protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6C29A
Putative Leu/Ile/Val-binding protein (LivJ) {ECO:0000313|EMBL:CCH80071.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
extracellular ligand-binding receptor
S1-18-all-fractions_k255_4089452_8
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9367..10284
DNA (918bp) protein (306aa)
branched-chain amino acid ABC transporter permease n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B774CD
Leucine/isoleucine/valine transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CCH80070.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
inner-membrane translocator
S1-18-all-fractions_k255_4089452_9
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10281..12515
DNA (2235bp) protein (745aa)
ABC transporter permease n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B40710
ABC-type branched-chain amino acid transport system, permease component (LivM) {ECO:0000313|EMBL:CCH80069.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
inner-membrane translocator
S1-18-all-fractions_k255_4089452_10
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12512..13549
DNA (1038bp) protein (346aa)
Branched-chain amino acid ABC transporter n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HG56_STRPR
Leucine/isoleucine/valine transporter subunit ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CCH80068.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
ABC transporter-like protein
S1-18-all-fractions_k255_4089452_11
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13546..14274
DNA (729bp) protein (243aa)
amino acid ABC transporter ATPase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B36665
Leucine/isoleucine/valine transporter subunit ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CCH80067.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
ABC transporter-like protein
S1-18-all-fractions_k255_4089452_12
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14485..15069
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B42C3E
GCN5 family acetyltransferase {ECO:0000313|EMBL:KJK10621.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
N-acetyltransferase GCN5
S1-18-all-fractions_k255_4089452_13
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15066..15518
DNA (453bp) protein (151aa)
phenylacetic acid degradation protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B64FAC
phenylacetic acid degradation-related protein
Phenylacetic acid degradation-related protein {ECO:0000313|EMBL:CAM04673.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
S1-18-all-fractions_k255_4089452_14
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15560..18316
DNA (2757bp) protein (919aa)
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B56ABF
DNA polymerase I {ECO:0000313|EMBL:KGH44550.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
S1-18-all-fractions_k255_4089452_15
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18488..19222)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000364CB30
Uncharacterized protein {ECO:0000313|EMBL:CCH72084.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
hypothetical protein
S1-18-all-fractions_k255_4089452_16
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19316..20770
DNA (1455bp) protein (485aa)
Acyl-CoA synthase n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9X5Y0_STRVR
Acyl-CoA synthase {ECO:0000313|EMBL:EFL36111.1}; TaxID=591159 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes DSM 40736.;"
acyl-CoA synthase
S1-18-all-fractions_k255_4089452_17
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20731..22011)
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6CD68
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EOD64070.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
Putative membrane protein
S1-18-all-fractions_k255_4089452_18
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22138..23853
DNA (1716bp) protein (572aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00036D6C88
Uncharacterized protein {ECO:0000313|EMBL:EWT02981.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
hypothetical protein
S1-18-all-fractions_k255_4089452_19
unknown

Not on your lists

23914..24066
DNA (153bp) protein (51aa)

This feature has no annotations

S1-18-all-fractions_k255_4089452_20
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24051..25178)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000369A7E0
Glycosyl transferase {ECO:0000313|EMBL:EWT02886.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
group 1 glycosyl transferase
S1-18-all-fractions_k255_4089452_21
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25327..29490
DNA (4164bp) protein (1388aa)
Putative methyltransferase n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H269_ACTM4
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:BAL87106.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
S1-18-all-fractions_k255_4089452_22
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29316..30566)
DNA (1251bp) protein (417aa)
acyltransferase n=1 Tax=Salinispora pacifica RepID=UPI00035E5551
Acyltransferase {ECO:0000313|EMBL:EWM66993.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
acyltransferase 3
S1-18-all-fractions_k255_4089452_23
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30563..32458)
DNA (1896bp) protein (632aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI0003783862
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB32162.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
S1-18-all-fractions_k255_4089452_24
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32583..33533
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037DF072
Uncharacterized protein {ECO:0000313|EMBL:EWT02978.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
membrane protein
S1-18-all-fractions_k255_4089452_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33511..34341)
DNA (831bp) protein (277aa)
SAM-dependent methyltransferase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6B557
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AEA26041.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
S1-18-all-fractions_k255_4089452_26
Williamsia sp. D3, Williamsia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


34660..35331
DNA (672bp) protein (224aa)
30S ribosomal protein S1 n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B340CD
30S ribosomal protein S1 {ECO:0000313|EMBL:ETD31320.1}; TaxID=1313067 species="Bacteria; Actinobacteria; Corynebacteriales; Williamsiaceae; Williamsia.;" source="Williamsia sp. D3.;"
SSU ribosomal protein S1p
Displaying 26 items

View Taxonomy