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S1-18-all-fractions_k255_4624340

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_4624340_1
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..147)
DNA (147bp) protein (49aa)
poly(A) polymerase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B66BF8
polynucleotide adenylyltransferase/metal dependent phosphohydrolase
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase {ECO:0000313|EMBL:ADD46052.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
S1-18-all-fractions_k255_4624340_2
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

187..654
DNA (468bp) protein (156aa)
NUDIX hydrolase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3DDE5
ADP-ribose pyrophosphatase
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:CCG05833.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
S1-18-all-fractions_k255_4624340_3
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

651..2819
DNA (2169bp) protein (723aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B74358
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH90949.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
S1-18-all-fractions_k255_4624340_4
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2816..4753
DNA (1938bp) protein (646aa)
membrane protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5A5CA
integral membrane protein MviN
Integral membrane protein MviN {ECO:0000313|EMBL:ADB77609.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S1-18-all-fractions_k255_4624340_5
Kytococcus sedentarius, Kytococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4823..5788
DNA (966bp) protein (322aa)
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=478801 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Kytococcus.;" source="Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541); (Micrococcus sedentarius).;"
thioredoxin reductase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5BA51
S1-18-all-fractions_k255_4624340_6
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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5875..6201
DNA (327bp) protein (109aa)
thioredoxin n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B452E6
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
S1-18-all-fractions_k255_4624340_7
unknown

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6253..7287
DNA (1035bp) protein (345aa)

This feature has no annotations

S1-18-all-fractions_k255_4624340_8
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8083..8706)
DNA (624bp) protein (208aa)
N-acetyltransferase GCN5 n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B508B6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ00489.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
S1-18-all-fractions_k255_4624340_9

Not on your lists

comp(8712..9938)
DNA (1227bp) protein (409aa)
aminotransferase AlaT n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B705E8
Aminotransferase AlaT {ECO:0000313|EMBL:KGA16602.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
aminotransferase AlaT
S1-18-all-fractions_k255_4624340_10
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10007..10627
DNA (621bp) protein (207aa)
nitroreductase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B40E13
Nitroreductase {ECO:0000313|EMBL:KJK10380.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
nitroreductase
S1-18-all-fractions_k255_4624340_11
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10633..11610)
DNA (978bp) protein (326aa)
plasmid partitioning protein ParB n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5D118
parB; chromosome-partitioning protein parB
Chromosome-partitioning protein parB {ECO:0000313|EMBL:CCG05844.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
S1-18-all-fractions_k255_4624340_12
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11831..12667)
DNA (837bp) protein (279aa)
chromosome partitioning protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B4F872
Chromosome partitioning protein {ECO:0000313|EMBL:KGH48461.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
cobyrinic acid ac-diamide synthase
S1-18-all-fractions_k255_4624340_13
Mycobacterium thermoresistibile, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13055..13726)
DNA (672bp) protein (224aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1078020 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium thermoresistibile ATCC 19527.;"
16S rRNA methyltransferase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B63B7B
gidB; 16S rRNA methyltransferase GidB
S1-18-all-fractions_k255_4624340_14
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13723..14280)
DNA (558bp) protein (186aa)
single-stranded DNA-binding protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5BCBB
Single-stranded nucleic acid binding R3H domain protein
Single-stranded nucleic acid binding R3H domain protein {ECO:0000313|EMBL:CCH35757.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
S1-18-all-fractions_k255_4624340_15
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14380..15564)
DNA (1185bp) protein (395aa)
membrane protein insertase YidC n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5F8BF
Membrane protein insertase YidC {ECO:0000313|EMBL:KGH48463.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
membrane protein insertase, YidC/Oxa1 family
S1-18-all-fractions_k255_4624340_16
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15564..15905)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Frankia sp. BCU110501 RepID=UPI00037A17B5
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
S1-18-all-fractions_k255_4624340_17
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15902..16198)
DNA (297bp) protein (99aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
ribonuclease P n=1 Tax=Saccharomonospora saliphila RepID=UPI00037401E8
ribonuclease P protein component
S1-18-all-fractions_k255_4624340_18
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(16297..16434)
DNA (138bp) protein (46aa)
50S ribosomal protein L34 n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F7ZZF1_CELGA
ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
S1-18-all-fractions_k255_4624340_19
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17019..18557
DNA (1539bp) protein (513aa)
chromosomal replication initiation protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B68274
chromosomal replication initiator protein DnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
S1-18-all-fractions_k255_4624340_20
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19010..19933
DNA (924bp) protein (308aa)
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Streptomyces sp. HPH0547 RepID=S3ASZ1_9ACTO
6-phosphogluconate dehydrogenase {ECO:0000313|EMBL:KJK57880.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
putative NAD-dependent 6-phosphogluconate dehydrogenase
S1-18-all-fractions_k255_4624340_21
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19956..21098
DNA (1143bp) protein (381aa)
DNA repair protein RecF n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B30D45
DNA replication and repair protein recF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
S1-18-all-fractions_k255_4624340_22
Nocardia asteroides, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21364..21810
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5DB18
UPF0232 protein NCAST_27_00220 {ECO:0000256|HAMAP-Rule:MF_00630}; TaxID=1110697 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia asteroides NBRC 15531.;"
putative RNA-binding protein containing Zn ribbon
S1-18-all-fractions_k255_4624340_23
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22116..22916
DNA (801bp) protein (267aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
DNA gyrase subunit B n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B375D3
gyrB; DNA gyrase B subunit gyrB
Displaying 23 items

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