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S1-18-all-fractions_k255_4940880

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_4940880_1
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..883)
DNA (882bp) protein (294aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
pyruvate dehydrogenase E1 n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B745BC
aceE; pyruvate dehydrogenase subunit E1
S1-18-all-fractions_k255_4940880_2
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1046..1504
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B4714F
Uncharacterized protein {ECO:0000313|EMBL:EXG80790.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
S1-18-all-fractions_k255_4940880_3
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1501..2016
DNA (516bp) protein (172aa)
peroxiredoxin n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6583B
Peroxiredoxin, bcp type {ECO:0000313|EMBL:CCH20482.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
S1-18-all-fractions_k255_4940880_4
Gordonia araii, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2073..2651)
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Gordonia araii NBRC 100433 RepID=G7H6U5_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB11570.1}; TaxID=1073574 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia araii NBRC 100433.;"
carbonic anhydrase
S1-18-all-fractions_k255_4940880_5
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2774..3631)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B382BE
Putative membrane protein {ECO:0000313|EMBL:EFL27151.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
hypothetical protein
S1-18-all-fractions_k255_4940880_6
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3843..4211)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI00036F1E5A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETW97326.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
S1-18-all-fractions_k255_4940880_7
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4208..4402)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Mycobacterium sp. (strain JDM601) RepID=F5YTN5_MYCSD
Uncharacterized protein {ECO:0000313|EMBL:KJR06546.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
hypothetical protein
S1-18-all-fractions_k255_4940880_8
unknown

Not on your lists

5183..5449
DNA (267bp) protein (89aa)

This feature has no annotations

S1-18-all-fractions_k255_4940880_9
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5446..6150)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI000378E035
N-acetyltransferase GCN5
GCN5-related protein N-acetyltransferase {ECO:0000313|EMBL:ACQ81057.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
S1-18-all-fractions_k255_4940880_10
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6415..6810
DNA (396bp) protein (132aa)
cupin n=1 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI00037A3E14
Cupin {ECO:0000313|EMBL:KIC64470.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
Cupin 2 barrel domain-containing protein
S1-18-all-fractions_k255_4940880_11
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6876..7928
DNA (1053bp) protein (351aa)
NADP-dependent alcohol dehydrogenase (EC:1.1.1.2)
NADP-dependent alcohol dehydrogenase n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1B689_RHOOB
Zinc-binding dehydrogenase {ECO:0000313|EMBL:KGM03744.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
S1-18-all-fractions_k255_4940880_12
unknown

Not on your lists

comp(7970..8323)
DNA (354bp) protein (118aa)

This feature has no annotations

S1-18-all-fractions_k255_4940880_13
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8379..8663)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00037E581F
Uncharacterized protein {ECO:0000313|EMBL:KGN41326.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
hypothetical protein
S1-18-all-fractions_k255_4940880_14
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8669..9631)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI000367CBE7
NmrA family protein
NmrA family protein {ECO:0000313|EMBL:ABS04127.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
S1-18-all-fractions_k255_4940880_15
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9683..10882
DNA (1200bp) protein (400aa)
Putative MFS transporter n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H9D9_ACTM4
putative MFS transporter
Putative MFS transporter {ECO:0000313|EMBL:BAL89626.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
S1-18-all-fractions_k255_4940880_16
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10899..11654)
DNA (756bp) protein (252aa)
Putative hydrolase n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1B7N6_RHOOB
Haloacid dehalogenase {ECO:0000313|EMBL:KJK50019.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
hydrolase
S1-18-all-fractions_k255_4940880_17
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11759..13405)
DNA (1647bp) protein (549aa)
Uncharacterized protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LWB4_ACIC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK53724.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
S1-18-all-fractions_k255_4940880_18
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13611..14111
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2J6K5_FRASC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDA41800.1}; TaxID=683305 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
S1-18-all-fractions_k255_4940880_19
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14122..14730)
DNA (609bp) protein (203aa)
lysine transporter LysE n=1 Tax=Nesterenkonia alba RepID=UPI0003B38085
putative threonine efflux protein
Putative threonine efflux protein {ECO:0000313|EMBL:AJT63819.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
S1-18-all-fractions_k255_4940880_20
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14772..15815)
DNA (1044bp) protein (348aa)
N-dimethylarginine dimethylaminohydrolase n=1 Tax=Pseudomonas sp. GM17 RepID=J3DRH3_9PSED
inosamine-phosphate amidinotransferase 1
Inosamine-phosphate amidinotransferase 1 {ECO:0000313|EMBL:AJT63818.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
S1-18-all-fractions_k255_4940880_21
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16092..16889)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI0003647660
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJK59161.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
S1-18-all-fractions_k255_4940880_22
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17082..18755
DNA (1674bp) protein (558aa)
ABC transporter ATP-binding protein n=2 Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2JQP8_STRHJ
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AEY92902.1}; TaxID=1133850 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
S1-18-all-fractions_k255_4940880_23
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18829..20307
DNA (1479bp) protein (493aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI000361EB9F
Putative glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:GAB94037.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
glycerophosphoryl diester phosphodiesterase
S1-18-all-fractions_k255_4940880_24
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20411..21562
DNA (1152bp) protein (384aa)
Transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family protein n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1KLZ6_9ACTO
Transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family protein {ECO:0000313|EMBL:EKX61584.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
HoxN/HupN/NixA family nickel/cobalt transporter
S1-18-all-fractions_k255_4940880_25
unknown

Not on your lists

comp(21581..21796)
DNA (216bp) protein (72aa)

This feature has no annotations

S1-18-all-fractions_k255_4940880_26
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21880..22515)
DNA (636bp) protein (212aa)
alkylated DNA repair protein n=1 Tax=Amycolatopsis alba RepID=UPI000362353F
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIG77683.1}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
S1-18-all-fractions_k255_4940880_27
unknown

Not on your lists

comp(22554..22769)
DNA (216bp) protein (72aa)

This feature has no annotations

S1-18-all-fractions_k255_4940880_28
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(22843..25029)
DNA (2187bp) protein (729aa)
Putative diguanylate cyclase/phosphodiesterase with PAS sensor n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W724_9ACTO
putative diguanylate cyclase/phosphodiesterase with PAS sensor
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
S1-18-all-fractions_k255_4940880_29
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25134..25889
DNA (756bp) protein (252aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5F8CC
hypothetical protein
Displaying 29 items

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