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S1-18-all-fractions_k255_7253128_29

Organism: S1-18-all-fractions_metab_conc_1

partial RP 33 / 55 BSCG 38 / 51 MC: 4 ASCG 13 / 38 MC: 4
Location: comp(32139..32759)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Frankia sp. QA3 RepID=I9A058_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 204.0
  • Bit_score: 209
  • Evalue 2.20e-51
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EIV92761.1}; Flags: Precursor;; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 204.0
  • Bit_score: 209
  • Evalue 3.00e-51
sigma-24 similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 200.0
  • Bit_score: 208
  • Evalue 1.80e-51

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Taxonomy

Frankia sp. QA3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGCTGACGCGATTGCGTCCCGACGGTGAAGACCTGCCCGATCAACGGCCGGTCCTGACCCCGCCCCGGCTGCCCGACGACCGAGTGACCGCAGTGGTACTGGCAGCGCAGGCCGGCGAGGAAGAGGCCTTCAGCGAGCTGTACCACCACGTGCAGCCCGGACTGCTGCGCTACCTCACCGTTCTGGTCGGTCGCGACGCCGAGGACATCGCCTCCGAGACCTGGCTGCAGGTCTGTCGCGATCTGCACACCTTCACCGGCGATGCCGACGGTTTCCGCGGCTGGGTAGCCACCATCGGACGGCACCGAGGGCTGGACTACCTCCGCAGCCGCAGCCGGCGTCCCGCCGACCCGGCCGAGTGGGACACCCTGCTCGCAGTCCCCGGCCATGAGGACACGGCGGTCCAGGCGGAGGAGGCGCTGTCCACGTCCGCCGCGCTCCGGCTCATCGCGGAGCTGCCCCAGGAGCAGGCCGAAGCGGTGCTGCTGCGCGCCGTGATCGGCCTGGACGCCAAGAGTGCGGCCGCGGTGCTGGGCAAGAGCCCGGGAGCGGTGCGGACCTCGGCCTACCGTGGCCTGAAGAATCTCGCCGCCATGCTGGAGCGCGGCCGTACCGACTGA
PROTEIN sequence
Length: 207
MLTRLRPDGEDLPDQRPVLTPPRLPDDRVTAVVLAAQAGEEEAFSELYHHVQPGLLRYLTVLVGRDAEDIASETWLQVCRDLHTFTGDADGFRGWVATIGRHRGLDYLRSRSRRPADPAEWDTLLAVPGHEDTAVQAEEALSTSAALRLIAELPQEQAEAVLLRAVIGLDAKSAAAVLGKSPGAVRTSAYRGLKNLAAMLERGRTD*