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S1-18-all-fractions_k255_7253128

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_7253128_1
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..640
DNA (639bp) protein (213aa)
ABC transporter ATP-binding protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B4AEC0
ABC transporter
ABC-1 domain protein {ECO:0000313|EMBL:ADB76790.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S1-18-all-fractions_k255_7253128_2
unknown

Not on your lists

comp(1140..1337)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B2E99F
S1-18-all-fractions_k255_7253128_3
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1458..1820)
DNA (363bp) protein (121aa)
transcription factor WhiB n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3941D
putative transcriptional regulator WhiB
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
S1-18-all-fractions_k255_7253128_4
unknown

Not on your lists

comp(2001..2174)
DNA (174bp) protein (58aa)

This feature has no annotations

S1-18-all-fractions_k255_7253128_5
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2332..4419)
DNA (2088bp) protein (696aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
ATP-dependent DNA helicase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3151C
UvrD/REP helicase
S1-18-all-fractions_k255_7253128_6
Mycobacterium phlei, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4611..4859
DNA (249bp) protein (83aa)
glutaredoxin n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B48FBA
Glutaredoxin-like protein {ECO:0000313|EMBL:EID13360.1}; TaxID=1150599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium phlei RIVM601174.;"
glutaredoxin-like protein
S1-18-all-fractions_k255_7253128_7
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4861..5487
DNA (627bp) protein (209aa)
uridine kinase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B68854
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB76797.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S1-18-all-fractions_k255_7253128_8
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5576..6508)
DNA (933bp) protein (311aa)
NAD(+) diphosphatase (EC:3.6.1.22)
NAD(+) diphosphatase {ECO:0000313|EMBL:ACZ91009.1}; EC=3.6.1.22 {ECO:0000313|EMBL:ACZ91009.1};; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
NUDIX hydrolase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B620C5
S1-18-all-fractions_k255_7253128_9
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6546..7880)
DNA (1335bp) protein (445aa)
peptidase M16 n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B38652
peptidase M16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:ADB76799.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S1-18-all-fractions_k255_7253128_10
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7877..9193)
DNA (1317bp) protein (439aa)
peptidase M16 n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B743F6
peptidase m16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:ADL48803.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
S1-18-all-fractions_k255_7253128_11
unknown

Not on your lists

comp(9220..9957)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B648AF
S1-18-all-fractions_k255_7253128_12
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10043..11422)
DNA (1380bp) protein (460aa)
peptidase M20 n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B48884
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase {ECO:0000313|EMBL:CCG04887.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
S1-18-all-fractions_k255_7253128_13
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11543..14839)
DNA (3297bp) protein (1099aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
DNA helicase UvrD n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B637B4
UvrD/REP helicase
S1-18-all-fractions_k255_7253128_14
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14836..18006)
DNA (3171bp) protein (1057aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
DNA helicase UvrD n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5E064
UvrD/REP helicase
S1-18-all-fractions_k255_7253128_15
Brachybacterium phenoliresistens, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18266..19030
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036C9386
Penicillin-binding protein {ECO:0000313|EMBL:EWS80111.1}; TaxID=396014 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium phenoliresistens.;"
penicillin-binding protein, beta-lactamase class C
S1-18-all-fractions_k255_7253128_16
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19104..19400)
DNA (297bp) protein (99aa)
methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B77DFA
methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding protein
Methylated-DNA-(Protein)-cysteine S-methyltransferase DNA binding protein {ECO:0000313|EMBL:ADG89674.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
S1-18-all-fractions_k255_7253128_17
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19423..20583)
DNA (1161bp) protein (387aa)
molybdopterin biosynthesis MoeZ n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B37A46
moeB; Molybdopterin-synthase sulfurylase
Molybdopterin-synthase sulfurylase {ECO:0000313|EMBL:CCG04899.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
S1-18-all-fractions_k255_7253128_18
Gordonia malaquae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20739..21710)
DNA (972bp) protein (324aa)
membrane protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B726E7
Uncharacterized protein {ECO:0000313|EMBL:GAC78036.1}; TaxID=1223542 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia malaquae NBRC 108250.;"
hypothetical protein
S1-18-all-fractions_k255_7253128_19
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21715..22818)
DNA (1104bp) protein (368aa)
alpha/beta hydrolase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B781F6
Hydrolase {ECO:0000313|EMBL:KJK44665.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
alpha/beta hydrolase fold containing protein
S1-18-all-fractions_k255_7253128_20
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23005..23670
DNA (666bp) protein (222aa)
TetR family transcriptional regulator n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6E950
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADD44232.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
S1-18-all-fractions_k255_7253128_21
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23814..24041
DNA (228bp) protein (76aa)
ATP-binding protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B7620D
ATP-binding protein {ECO:0000313|EMBL:KEI43313.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
hypothetical protein
S1-18-all-fractions_k255_7253128_22
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24109..24768)
DNA (660bp) protein (220aa)
hydroxylase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B574E0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD44246.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
S1-18-all-fractions_k255_7253128_23
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25037..26692
DNA (1656bp) protein (552aa)
DEAD/DEAH box helicase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B67A4D
ATP-dependent RNA helicase
ATP-dependent RNA helicase {ECO:0000313|EMBL:AEK39618.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
S1-18-all-fractions_k255_7253128_24
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26715..27962
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5A2DC
Uncharacterized protein {ECO:0000313|EMBL:KGH44756.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
S1-18-all-fractions_k255_7253128_25
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27970..28845
DNA (876bp) protein (292aa)
lysophospholipase (EC:3.1.1.5)
Lysophospholipase {ECO:0000313|EMBL:CCG04908.1}; EC=3.1.1.5 {ECO:0000313|EMBL:CCG04908.1};; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
alpha/beta hydrolase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6CF30
S1-18-all-fractions_k255_7253128_26
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28902..29771)
DNA (870bp) protein (290aa)
RecB family exonuclease n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B33F5C
RecB family exonuclease {ECO:0000313|EMBL:EIV95711.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
hypothetical protein
S1-18-all-fractions_k255_7253128_27
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29768..31069)
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B4233A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL44443.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
S1-18-all-fractions_k255_7253128_28
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31307..32314
DNA (1008bp) protein (336aa)
Bifunctional protein (Histidine kinase and regulator) n=1 Tax=Streptomyces mobaraensis NBRC 13819 = DSM 40847 RepID=M3A5V3_STRMB
Bifunctional protein (Histidine kinase and regulator) {ECO:0000313|EMBL:EMF00484.1}; TaxID=1223523 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis NBRC 13819 = DSM 40847.;"
S1-18-all-fractions_k255_7253128_29
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32139..32759)
DNA (621bp) protein (207aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Frankia sp. QA3 RepID=I9A058_9ACTO
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EIV92761.1}; Flags: Precursor;; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
sigma-24
S1-18-all-fractions_k255_7253128_30
Streptomyces griseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32999..33154)
DNA (156bp) protein (52aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI00035ECDE8
SCJ9A.10c; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIX50483.1}; TaxID=1911 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseus.;"
Displaying items 1-30 of 33 in total

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