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S1-18-all-fractions_k255_904814

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_904814_1

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comp(3..1226)
DNA (1224bp) protein (408aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
thrA; aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=uncultured archaeon RepID=I3RKW3_9ARCH
S1-18-all-fractions_k255_904814_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1313..2065)
DNA (753bp) protein (251aa)
DNA polymerase sliding clamp n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INI8_NITGG
pcn; DNA polymerase sliding clamp
DNA polymerase sliding clamp {ECO:0000256|HAMAP-Rule:MF_00317, ECO:0000256|RuleBase:RU003673}; Proliferating cell nuclear antigen homolog {ECO:0000256|HAMAP-Rule:MF_00317}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S1-18-all-fractions_k255_904814_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2151..2450)
DNA (300bp) protein (100aa)
Putative DNA-directed RNA polymerase subunit M n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHM2_NITGG
rpoM; DNA-directed RNA polymerase subunit M
Putative DNA-directed RNA polymerase subunit M {ECO:0000313|EMBL:AFU59450.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S1-18-all-fractions_k255_904814_4

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comp(2482..2805)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=uncultured archaeon RepID=I3RKW0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AFK24970.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpoL; DNA-directed RNA polymerase subunit L
S1-18-all-fractions_k255_904814_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2818..3339
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILE1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59452.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S1-18-all-fractions_k255_904814_6
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3416..3562
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8C0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16811.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
S1-18-all-fractions_k255_904814_7
unknown

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comp(3604..3750)
DNA (147bp) protein (49aa)

This feature has no annotations

S1-18-all-fractions_k255_904814_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3928..5232
DNA (1305bp) protein (435aa)
asnS; asparagine--tRNA ligase (EC:6.1.1.22)
Asparagine--tRNA ligase {ECO:0000313|EMBL:AFU57434.1}; EC=6.1.1.22 {ECO:0000313|EMBL:AFU57434.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Asparagine--tRNA ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILY2_NITGG
S1-18-all-fractions_k255_904814_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5331..6137
DNA (807bp) protein (269aa)
Putative transcriptional regulator, ArsR family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILW7_NITGG
arsR family transcriptional regulator
Putative transcriptional regulator, ArsR family {ECO:0000313|EMBL:AFU59742.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S1-18-all-fractions_k255_904814_10
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6196..6426
DNA (231bp) protein (77aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIK9_NITGG
putative transcriptional regulator, AsnC family
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:AIC17200.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
S1-18-all-fractions_k255_904814_11
unknown

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6515..6685
DNA (171bp) protein (57aa)

This feature has no annotations

S1-18-all-fractions_k255_904814_12
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6714..7709
DNA (996bp) protein (332aa)
Putative rhomboid family protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILW5_NITGG
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:AIF83265.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
S1-18-all-fractions_k255_904814_13
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7797..8408
DNA (612bp) protein (204aa)
Rieske (2Fe-2S) domain protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYL6_9ARCH
petC; putative Rieske 2Fe-2S domain cytochrome b6-f complex iron-sulfur subunit
Putative Rieske 2Fe-2S domain cytochrome b6-f complex iron-sulfur subunit {ECO:0000313|EMBL:AIC14448.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
S1-18-all-fractions_k255_904814_14
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8389..9948
DNA (1560bp) protein (520aa)
Putative cytochrome b/b6/petB n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJE8_NITGG
petB; putative cytochrome b/b6
Putative cytochrome b/b6 {ECO:0000313|EMBL:AIC14447.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
S1-18-all-fractions_k255_904814_15
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10011..10487
DNA (477bp) protein (159aa)
Putative blue (Type 1) copper domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAN2_NITGG
plastocyanin
Plastocyanin {ECO:0000313|EMBL:AIF85553.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
S1-18-all-fractions_k255_904814_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10482..10862)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF30_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58385.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S1-18-all-fractions_k255_904814_17
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(11772..11960)
DNA (189bp) protein (63aa)
preprotein translocase subunit SecE n=1 Tax=Nitrosopumilus maritimus RepID=UPI000159A9DF
secE; protein translocase SecE subunit
Protein translocase SecE subunit {ECO:0000313|EMBL:AIC17276.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
S1-18-all-fractions_k255_904814_18
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12034..12522)
DNA (489bp) protein (163aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJJ8_NITGG
transcriptional regulator, AsnC family
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:AIF83346.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Displaying 18 items

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