ggKbase home page

S1-18-all-fractions_k255_3304127

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_3304127_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(2..967)
DNA (966bp) protein (322aa)
Putative oxidoreductase domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKM1_NITGG
oxidoreductase domain-containing protein
Putative oxidoreductase domain protein {ECO:0000313|EMBL:AFU59037.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S1-18-all-fractions_k255_3304127_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(961..1884)
DNA (924bp) protein (308aa)
ilvE1; branched-chain amino-acid aminotransferase (EC:2.6.1.42)
Branched-chain amino-acid aminotransferase {ECO:0000313|EMBL:AFU59038.1}; EC=2.6.1.42 {ECO:0000313|EMBL:AFU59038.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Branched-chain amino-acid aminotransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIX0_NITGG
S1-18-all-fractions_k255_3304127_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(1936..2559)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGS4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59040.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S1-18-all-fractions_k255_3304127_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(2700..3026)
DNA (327bp) protein (109aa)
DNA/RNA-binding protein Alba n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIX5_NITGG
albA; DNA/RNA-binding protein Alba
DNA/RNA-binding protein Alba {ECO:0000256|HAMAP-Rule:MF_01122}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S1-18-all-fractions_k255_3304127_5
Pyrococcus sp. ST04, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

3357..4982
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RFG3_9EURY
circadian clock KaiC-like protein
Uncharacterized protein {ECO:0000313|EMBL:AFK22973.1}; TaxID=1183377 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. ST04.;"
S1-18-all-fractions_k255_3304127_6
unknown

Not on your lists

5020..5379
DNA (360bp) protein (120aa)

This feature has no annotations

S1-18-all-fractions_k255_3304127_7
unknown

Not on your lists

comp(5848..5988)
DNA (141bp) protein (47aa)

This feature has no annotations

S1-18-all-fractions_k255_3304127_8

Not on your lists

6777..7121
DNA (345bp) protein (115aa)
H+ ATPase subunit K (EC:3.6.3.15)
Putative ATP synthase subunit C n=2 Tax=environmental samples RepID=B3TBH1_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF06356.1}; TaxID=1456080 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_191_E02.;"
S1-18-all-fractions_k255_3304127_9

Not on your lists

7158..7721
DNA (564bp) protein (188aa)
V-type H+-transporting ATPase subunit E (EC:3.6.3.14)
Putative ATP synthase (E/31 kDa) subunit n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW97J3 RepID=B3T378_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKK82527.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S1-18-all-fractions_k255_3304127_10

Not on your lists

7723..8799
DNA (1077bp) protein (359aa)
V-type ATP synthase subunit C (EC:3.6.3.14)
V-type ATP synthase subunit C n=2 Tax=environmental samples RepID=B3TBG9_9ARCH
V-type ATP synthase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; V-ATPase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; TaxID=1456224 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_65_D04.;"
S1-18-all-fractions_k255_3304127_11

Not on your lists

8801..9145
DNA (345bp) protein (115aa)
V-type ATP synthase subunit F n=3 Tax=environmental samples RepID=B3T376_9ARCH
V-type ATP synthase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; V-ATPase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; TaxID=1456056 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_175_G11.;"
V-type ATP synthase subunit F
S1-18-all-fractions_k255_3304127_12

Not on your lists

9174..10940
DNA (1767bp) protein (589aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1456047 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_170_G11.;"
V-type ATP synthase alpha chain n=2 Tax=environmental samples RepID=B3TBG7_9ARCH
hypothetical protein
S1-18-all-fractions_k255_3304127_13

Not on your lists

10943..12343
DNA (1401bp) protein (467aa)
V-type ATP synthase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW137N13 RepID=B3T4W5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKM75813.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S1-18-all-fractions_k255_3304127_14

Not on your lists

12357..13022
DNA (666bp) protein (222aa)
V-type ATP synthase subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW97J3 RepID=B3T373_9ARCH
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1456388 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote SAT1000_16_E03.;"
S1-18-all-fractions_k255_3304127_15
unknown

Not on your lists

13015..13188
DNA (174bp) protein (58aa)

This feature has no annotations

S1-18-all-fractions_k255_3304127_16
uncultured marine crenarchaeote HF4000_APKG9M20, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

13197..13526
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_APKG9M20 RepID=B3TBG4_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ09923.1}; TaxID=455608 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000_APKG9M20.;"
S1-18-all-fractions_k255_3304127_17

Not on your lists

13543..15567
DNA (2025bp) protein (675aa)
V-type ATP synthase subunit I (ATPVI, ntpI) {ECO:0000313|EMBL:AIF13972.1}; EC=3.6.3.14 {ECO:0000313|EMBL:AIF13972.1};; TaxID=1456224 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_65_D04.;"
Putative V-type ATPase 116kDa subunit family protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW137N13 RepID=B3T4W8_9ARCH
hypothetical protein
S1-18-all-fractions_k255_3304127_18
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(16394..17713)
DNA (1320bp) protein (440aa)
FAD dependent oxidoreductase n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E2T0_9ARCH
FAD dependent oxidoreductase {ECO:0000313|EMBL:EPA05113.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
FAD dependent oxidoreductase
S1-18-all-fractions_k255_3304127_19

Not on your lists

comp(17875..18222)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=uncultured archaeon RepID=I3RKN4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AFK24894.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
S1-18-all-fractions_k255_3304127_20
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(18340..18660)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGA8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16120.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
S1-18-all-fractions_k255_3304127_21
Candidatus Nitrosopelagicus brevis, Candidatus Nitrosopelagicus, Thaumarchaeota, Archaea

Not on your lists

comp(18736..19500)
DNA (765bp) protein (255aa)
Ser/Thr protein kinase n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BF72_9ARCH
base excision DNA repair protein, HhH-GPD family
Base excision DNA repair protein, HhH-GPD family {ECO:0000313|EMBL:AJA92320.1}; TaxID=1410606 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Candidatus Nitrosopelagicus brevis.;"
S1-18-all-fractions_k255_3304127_22
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists


comp(19484..20965)
DNA (1482bp) protein (494aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA adenylyl-/cytidylyl- transferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA-NT {ECO:0000256|HAMAP-Rule:MF_01264}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
tRNA CCA-pyrophosphorylase (EC:2.7.7.72)
CCA-adding enzyme n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KLY1_9ARCH
S1-18-all-fractions_k255_3304127_23

Not on your lists

comp(20980..21534)
DNA (555bp) protein (185aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1456243 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_68_E02.;"
2'-5' RNA ligase
2'-5' RNA ligase id=14428119 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Displaying 23 items

View Taxonomy