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S1-18-all-fractions_k255_353336

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_353336_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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2..238
DNA (237bp) protein (79aa)
oligopeptide transport system permease protein AppB; K02033 peptide/nickel transport system permease protein id=24464125 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
binding-protein-dependent transport systems inner membrane component
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-18-all-fractions_k255_353336_2
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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235..1218
DNA (984bp) protein (328aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermocrinis albus (strain DSM 14484 / JCM 11386 / HI 11/12) RepID=D3SQ36_THEAH
binding-protein-dependent transporters inner membrane component
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-18-all-fractions_k255_353336_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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1317..2207
DNA (891bp) protein (297aa)
Dihydrodipicolinate synthase (EC:4.2.1.52)
dihydrodipicolinate synthase/N-acetylneuraminate lyase id=14429669 bin=bin3_NC10 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-18-all-fractions_k255_353336_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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2204..3355
DNA (1152bp) protein (384aa)
class V aminotransferase; K00830 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] id=12555737 bin=CNBR_ACIDO species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
class V aminotransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-18-all-fractions_k255_353336_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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3367..3591
DNA (225bp) protein (75aa)
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] id=12555739 bin=CNBR_ACIDO species=unknown genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase (EC:2.4.2.-)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying 5 items

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