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S1-18-all-fractions_k255_1492564

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_1492564_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..687)
DNA (687bp) protein (229aa)
cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] id=12557019 bin=CNBR_ACIDO species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_1492564_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(705..3014)
DNA (2310bp) protein (770aa)
FtsK/SpoIIIE family protein; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family id=12557020 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA translocase FtsK
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_1492564_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3015..4706)
DNA (1692bp) protein (564aa)
beta-lactamase-like; K12574 ribonuclease J [EC:3.1.-.-] id=12557021 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
beta-lactamase-like protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-18-all-fractions_k255_1492564_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(5086..5991)
DNA (906bp) protein (302aa)
putative peptidase C14 (EC:3.4.22.-)
Peptidase C14 caspase-1 catalytic subunit p20 {ECO:0000313|EMBL:ACE75682.1}; EC=3.4.22.- {ECO:0000313|EMBL:ACE75682.1};; Putative Peptidase C14 {ECO:0000313|EMBL:CBK41277.1}; EC=3.4.22.- {ECO:0000313|EMBL:CBK41277.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Peptidase C14 caspase-1 catalytic subunit p20 n=1 Tax=Candidatus Nitrospira defluvii RepID=B3U4W5_9BACT
S1-18-all-fractions_k255_1492564_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists


comp(6084..6890)
DNA (807bp) protein (269aa)
ksgA; putative ribosomal RNA small subunit methyltransferase A (EC:2.1.1.182); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] id=12557022 bin=CNBR_ACIDO species=Thauera terpenica genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dimethyladenosine transferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_1492564_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(7052..7498)
DNA (447bp) protein (149aa)
hypothetical protein id=12557024 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-18-all-fractions_k255_1492564_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(7495..8244)
DNA (750bp) protein (250aa)
nth; putative DNA glycosylase/AP lyase (EC:3.2.2.- 4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] id=12557025 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
endonuclease III (EC:4.2.99.18)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-18-all-fractions_k255_1492564_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(8249..8557)
DNA (309bp) protein (103aa)
id=12557026 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_1492564_9
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(8802..9407)
DNA (606bp) protein (202aa)
lexA; LexA repressor (EC:3.4.21.88)
LexA repressor id=3788297 bin=GWC2_TM7_48_9 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-18-all-fractions_k255_1492564_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

9472..10167
DNA (696bp) protein (232aa)
PfkB domain protein id=4131233 bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
ribokinase-like domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying 10 items

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