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S1-18-all-fractions_k255_1558227

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_1558227_1

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3..173
DNA (171bp) protein (57aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUD4_9BACT
Xylose isomerase {ECO:0000313|EMBL:AIF34053.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
S1-18-all-fractions_k255_1558227_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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308..994
DNA (687bp) protein (229aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_1558227_3
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(1203..1673)
DNA (471bp) protein (157aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_1558227_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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1828..2382
DNA (555bp) protein (185aa)
RNA polymerase sigma factor n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GAU3_9DELT
ECF subfamily RNA polymerase sigma-24 factor
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_1558227_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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2400..2879
DNA (480bp) protein (160aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_1558227_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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2906..3823
DNA (918bp) protein (306aa)
DNA adenine methylase (EC:2.1.1.72)
DNA adenine methylase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LV08_HALO1
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-18-all-fractions_k255_1558227_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

4157..5431
DNA (1275bp) protein (425aa)
trigger factor; K03545 trigger factor id=12555812 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
trigger factor
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_1558227_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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5628..6215
DNA (588bp) protein (196aa)
clpP; ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] id=12555811 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
clpP; ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-18-all-fractions_k255_1558227_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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6291..7538
DNA (1248bp) protein (416aa)
ATP-dependent Clp protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX id=12555810 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ATP-dependent Clp protease ATP-binding subunit ClpX
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S1-18-all-fractions_k255_1558227_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7701..9962
DNA (2262bp) protein (754aa)
Lon-A peptidase (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] id=12555809 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Lon-A peptidase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Displaying 10 items

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