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S1-18-all-fractions_k255_1824922

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_1824922_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

3..923
DNA (921bp) protein (307aa)
hypothetical protein id=12556165 bin=CNBR_ACIDO species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_1824922_2
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(907..2142)
DNA (1236bp) protein (412aa)
L-sorbosone dehydrogenase n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NHD4_GLOVI
L-sorbosone dehydrogenase
L-sorbosone dehydrogenase {ECO:0000313|EMBL:BAC90544.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
S1-18-all-fractions_k255_1824922_3
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2306..4669
DNA (2364bp) protein (788aa)
Copper-translocating P-type ATPase n=1 Tax=Geobacter sp. (strain M21) RepID=C6E8B6_GEOSM
ATPase P
Tax=GWC2_Geobacteraceae_58_44_curated
S1-18-all-fractions_k255_1824922_4
unknown

Not on your lists

4680..4772
DNA (93bp) protein (31aa)

This feature has no annotations

S1-18-all-fractions_k255_1824922_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

4860..6383
DNA (1524bp) protein (508aa)
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3); K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] id=12554719 bin=CNBR_ACIDO species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-18-all-fractions_k255_1824922_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(6209..7222)
DNA (1014bp) protein (338aa)
fliA1; RNA polymerase sigma factor for flagellar operon; K02405 RNA polymerase sigma factor for flagellar operon FliA id=12554720 bin=CNBR_ACIDO species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RNA polymerase sigma 28 subunit FliA/WhiG
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-18-all-fractions_k255_1824922_7

Not on your lists

comp(7562..7825)
DNA (264bp) protein (88aa)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:AHN97849.1}; TaxID=1447236 species="Bacteria; environmental samples.;" source="uncultured bacterium lac121.;"
id=12554721 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
S1-18-all-fractions_k255_1824922_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(7822..8034)
DNA (213bp) protein (71aa)
id=12554722 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-18-all-fractions_k255_1824922_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

8144..9529
DNA (1386bp) protein (462aa)
Fis family two component sigma-54 specific transcriptional regulator id=12554723 bin=CNBR_ACIDO species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Fis family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_1824922_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

9532..11259
DNA (1728bp) protein (576aa)
Pseudouridine synthase n=2 Tax=Methylobacterium extorquens RepID=C5B254_METEA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_1824922_11
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

11256..11606
DNA (351bp) protein (117aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-18-all-fractions_k255_1824922_12
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

11882..12424
DNA (543bp) protein (181aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-18-all-fractions_k255_1824922_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

12703..13326
DNA (624bp) protein (208aa)
lipoprotein id=12556220 bin=CNBR_ACIDO species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-18-all-fractions_k255_1824922_14
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

13364..14812
DNA (1449bp) protein (483aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HFU2_ANADF
two component sigma54 specific Fis family transcriptional regulator
Tax=RBG_16_Acidobacteria_70_10_curated
S1-18-all-fractions_k255_1824922_15
unknown

Not on your lists

15097..15543
DNA (447bp) protein (149aa)
id=12556219 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
S1-18-all-fractions_k255_1824922_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

15691..16908
DNA (1218bp) protein (406aa)
id=12556218 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-18-all-fractions_k255_1824922_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

16905..17111
DNA (207bp) protein (69aa)
GumA n=1 Tax=uncultured bacterium RepID=K1Y8C7_9BACT
putative capsule polysaccharide export protein precursor
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
Displaying 17 items

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