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S1-18-all-fractions_k255_3078449

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_3078449_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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2..328
DNA (327bp) protein (109aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-18-all-fractions_k255_3078449_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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974..1819
DNA (846bp) protein (282aa)
Methyltransferase type 12 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TPD8_9CHLR
Methyltransferase type 12 {ECO:0000313|EMBL:EFH87494.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
antibiotic biosynthesis protein LmbJ
S1-18-all-fractions_k255_3078449_3
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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2220..2684
DNA (465bp) protein (155aa)
alias=16ft_combo_ws3_scaffold_1406_39 id=24505318 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_3078449_4
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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comp(2816..4315)
DNA (1500bp) protein (500aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] id=12556043 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Adenosylhomocysteinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-18-all-fractions_k255_3078449_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(4412..5434)
DNA (1023bp) protein (341aa)
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator id=12556044 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Methyltransferase type 11
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-18-all-fractions_k255_3078449_6
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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5651..7417
DNA (1767bp) protein (589aa)
Phosphoribulokinase/uridine kinase id=2140430 bin=GWD2_Chloroflexi_49_16 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
phosphoribulokinase/uridine kinase family protein
Tax=RBG_16_Chloroflexi_63_12_curated
S1-18-all-fractions_k255_3078449_7
unknown

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7405..7557
DNA (153bp) protein (51aa)

This feature has no annotations

S1-18-all-fractions_k255_3078449_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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comp(7673..8134)
DNA (462bp) protein (154aa)
MutS2 protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HF24_9FIRM
MutS2 protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-18-all-fractions_k255_3078449_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(8242..8973)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000377C0BC
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_3078449_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

9311..9553
DNA (243bp) protein (81aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_3078449_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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9573..10298
DNA (726bp) protein (242aa)
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Aquifex aeolicus (strain VF5) RepID=LEUC_AQUAE id=5224304 bin=16ft_combo_ws3_JS1 species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 11 items

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