ggKbase home page

S1-18-all-fractions_k255_4382154

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_4382154_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..393)
DNA (393bp) protein (131aa)
DSBA oxidoreductase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF76_9BACT
DSBA oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
S1-18-all-fractions_k255_4382154_2
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

507..1118
DNA (612bp) protein (204aa)
Phosphoglycerate mutase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B2X3_HERA2
Phosphoglycerate mutase {ECO:0000313|EMBL:KGO98886.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
Phosphoglycerate mutase
S1-18-all-fractions_k255_4382154_3
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1111..1548
DNA (438bp) protein (146aa)
NUDIX hydrolase n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7KIN1_CYAP7
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ACK69437.1}; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (Synechococcus sp. (strain ATCC; 29155)).;"
S1-18-all-fractions_k255_4382154_4
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

1621..2652
DNA (1032bp) protein (344aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRX7_9BACT
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:EHO42470.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
phosphoesterase PA-phosphatase-like protein
S1-18-all-fractions_k255_4382154_5
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2594..3739)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5J2_RAMTT
hypothetical protein
Glycosyltransferase {ECO:0000313|EMBL:KJB94137.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
S1-18-all-fractions_k255_4382154_6
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(3744..4829)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V7Y6_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE86686.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
S1-18-all-fractions_k255_4382154_7
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4826..5959)
DNA (1134bp) protein (378aa)
A-glycosyltransferase, Glycosyltransferase Family 4-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5J4_RAMTT
a-glycosyltransferase
A-glycosyltransferase, Glycosyltransferase Family 4-like protein {ECO:0000313|EMBL:AEG92690.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
S1-18-all-fractions_k255_4382154_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5947..7071)
DNA (1125bp) protein (375aa)
Glycosyl transferase family 1 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLX9_SORCE
glycosyl transferase family 1
Glycosyl transferase family 1 {ECO:0000313|EMBL:AGP32780.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
S1-18-all-fractions_k255_4382154_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7058..8362)
DNA (1305bp) protein (435aa)
Radical SAM protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y5K7_SORCE
radical SAM protein
Radical SAM protein {ECO:0000313|EMBL:AGP40099.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
S1-18-all-fractions_k255_4382154_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8359..9465)
DNA (1107bp) protein (369aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XS81_9BACT
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EEF57291.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
NAD-dependent epimerase/dehydratase
S1-18-all-fractions_k255_4382154_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9462..10577)
DNA (1116bp) protein (372aa)
Dehydratase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y3Q4_SORCE
dehydratase
Dehydratase {ECO:0000313|EMBL:AGP40097.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
S1-18-all-fractions_k255_4382154_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10866..11795)
DNA (930bp) protein (310aa)
Beta-xylosidase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y6T7_SORCE
beta-xylosidase
Beta-xylosidase {ECO:0000313|EMBL:AGP40156.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
S1-18-all-fractions_k255_4382154_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11788..12585)
DNA (798bp) protein (266aa)
SAM-dependent methyltransferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y3V5_SORCE
SAM-dependent methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:AGP40157.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
S1-18-all-fractions_k255_4382154_14
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12702..13499)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI0003750E20
FRG domain-containing protein
FRG domain-containing protein {ECO:0000313|EMBL:AJF05879.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterraneus.;"
S1-18-all-fractions_k255_4382154_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13624..14082
DNA (459bp) protein (153aa)
Cytochrome C nitrite reductase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XS51_SORCE
cytochrome C nitrite reductase
Cytochrome C nitrite reductase {ECO:0000313|EMBL:AGP34725.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
S1-18-all-fractions_k255_4382154_16
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14092..15558
DNA (1467bp) protein (489aa)
Cytochrome c-552 {ECO:0000256|SAAS:SAAS00233541}; EC=1.-.-.- {ECO:0000256|SAAS:SAAS00275652};; EC=1.7.2.2 {ECO:0000256|SAAS:SAAS00233490};; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
nrfA; nitrite reductase (EC:1.7.2.2)
Nitrite reductase (Cytochrome ammonia-forming) n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CX41_9BACT
S1-18-all-fractions_k255_4382154_17
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

15660..16082
DNA (423bp) protein (141aa)
Putative phosphoesterase, ICC n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WD52_9CYAN
phosphoesterase, ICC
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying 17 items

View Taxonomy