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S1-18-all-fractions_k255_7309167

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_7309167_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..162)
DNA (162bp) protein (54aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-18-all-fractions_k255_7309167_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(293..1822)
DNA (1530bp) protein (510aa)
glutamyl-tRNA synthetase / glutamate--tRNA(Gln) ligase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] id=12555605 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
gltX2; glutamate--tRNA ligase (EC:6.1.1.17)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_7309167_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(1845..3050)
DNA (1206bp) protein (402aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; K12506 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] id=12555606 bin=CNBR_ACIDO species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60 4.6.1.12)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_7309167_4
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(3146..3781)
DNA (636bp) protein (212aa)
hypothetical protein id=24480661 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-18-all-fractions_k255_7309167_5
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

4085..4468
DNA (384bp) protein (128aa)
hypothetical protein id=12556929 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-18-all-fractions_k255_7309167_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(4508..5260)
DNA (753bp) protein (251aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51); K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] id=12555607 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-18-all-fractions_k255_7309167_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(5261..6484)
DNA (1224bp) protein (408aa)
PilT protein-like id=12555608 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
twitching motility protein PilT
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_7309167_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(6556..7950)
DNA (1395bp) protein (465aa)
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms id=12555609 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA repair protein RadA
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-18-all-fractions_k255_7309167_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(7988..9127)
DNA (1140bp) protein (380aa)
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] id=12555610 bin=CNBR_ACIDO species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
alanine racemase (EC:5.1.1.1)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_7309167_10
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(9136..10494)
DNA (1359bp) protein (453aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] id=12555611 bin=CNBR_ACIDO species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
replicative DNA helicase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-18-all-fractions_k255_7309167_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists


comp(10804..11133)
DNA (330bp) protein (110aa)
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 id=12555612 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rplI; 50S ribosomal protein L9
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying 11 items

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