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S1-18-all-fractions_k255_6114283_8

Organism: S1-18-all-fractions_metab_42

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: 6566..7225

Top 3 Functional Annotations

Value Algorithm Source
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FNG2_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 194.0
  • Bit_score: 224
  • Evalue 6.90e-56
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 194.0
  • Bit_score: 224
  • Evalue 2.00e-56
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN98421.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 194.0
  • Bit_score: 224
  • Evalue 9.70e-56

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGGGGTTGCGTGCGCTGGTGCGCGACCCCGTCACGCCGGCCAGGAGAGACATGAACGATCACCTGATTTCGGTCCCCGGTCAGTCCCATGACGCCGCGCCGTCCGCCGAATCGACGGCGAACCGGTCGGCCGCCATGCAGGCGCTGGTCGACAATCACCGCACGTTCCTCCGCTTTCTCGAGCGGCGGGTGGGCAATCGGGACACAGCCGAAGACCTGCTGCAGGACGCGTTCGGCCGTGCCCTCGAACATCTCGACGAGCTCCGGGAGAACGAGTCGATCGTGGCCTGGTTCTACCGGGTGCTCCGGAATGCGGTGATCGATCATTACCGCCGGAGCGACGCCGCCCACCGCGCGGCAGAGGCATTCGCCCGCGACTTCGAGGAAGCAGTGCCGCCGCACGACGTGCACGACGCGATCTGCGCGTGCATCTCCGAGCTCGCCCGCACGCTCAAGCCAGAGTACGCCGAGGCGCTGCGGCAGATCGATGTCGAAGGCGTGCCGGTCAAGGAGTTCGCCGAGCGGTCCGGCATATCAGCCGGCAATGCCGGCGTCCGGGTGTTCCGCGCCCGCGAAGCGCTCCGTAGACAGGTGGTGGCTTCCTGCGGCACCTGCGCCGAGCACGGGTGCGTTGACTGCCGATGCGGTCGACCGCGCTGA
PROTEIN sequence
Length: 220
MGLRALVRDPVTPARRDMNDHLISVPGQSHDAAPSAESTANRSAAMQALVDNHRTFLRFLERRVGNRDTAEDLLQDAFGRALEHLDELRENESIVAWFYRVLRNAVIDHYRRSDAAHRAAEAFARDFEEAVPPHDVHDAICACISELARTLKPEYAEALRQIDVEGVPVKEFAERSGISAGNAGVRVFRAREALRRQVVASCGTCAEHGCVDCRCGRPR*