ggKbase home page

S1-18-all-fractions_k255_6114283

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_6114283_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

91..1158
DNA (1068bp) protein (356aa)
Uncharacterized protein id=12557383 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_6114283_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

1155..2594
DNA (1440bp) protein (480aa)
membrane bound O-acyl transferase MBOAT family protein id=12557384 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
membrane bound O-acyl transferase MBOAT family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_6114283_3
bacterium UASB270, Bacteria

Not on your lists

comp(2591..4066)
DNA (1476bp) protein (492aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. A2 RepID=G2HCQ4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:GAK58098.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein
S1-18-all-fractions_k255_6114283_4
bacterium UASB270, Bacteria

Not on your lists

comp(4063..4770)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LV50_DESBD
Uncharacterized protein {ECO:0000313|EMBL:GAK58099.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein
S1-18-all-fractions_k255_6114283_5
Desulfovibrio sp. A2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4783..5490)
DNA (708bp) protein (236aa)
VTC domain protein n=1 Tax=Desulfovibrio sp. A2 RepID=G2HCQ6_9DELT
VTC domain protein {ECO:0000313|EMBL:EGY24249.1}; TaxID=298701 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. A2.;"
hypothetical protein
S1-18-all-fractions_k255_6114283_6
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5722..6102
DNA (381bp) protein (127aa)
Chemotaxis protein CheY n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XP74_SORCE
chemotaxis protein CheY
Tax=RBG_16_Anaeromyxobacter_69_14_curated
S1-18-all-fractions_k255_6114283_7
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6270..6554
DNA (285bp) protein (95aa)
copper-transporting P-type ATPase family (EC:3.6.3.4)
Copper-transporting P-type ATPase family {ECO:0000313|EMBL:AJK50903.1}; EC=3.6.3.4 {ECO:0000313|EMBL:AJK50903.1};; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae PG1.;"
heavy metal transporter n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B76855
S1-18-all-fractions_k255_6114283_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6566..7225
DNA (660bp) protein (220aa)
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FNG2_SORC5
ECF family RNA polymerase sigma factor
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN98421.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
S1-18-all-fractions_k255_6114283_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

7296..8582
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000369CF36
oxidoreductase domain-containing protein
Tax=RBG_16_Acidobacteria_70_10_curated
S1-18-all-fractions_k255_6114283_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(8805..9713)
DNA (909bp) protein (303aa)
oxidoreductase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B63CF3
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EDY19042.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
short-chain dehydrogenase/reductase SDR
S1-18-all-fractions_k255_6114283_11
Shewanella decolorationis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9746..10249)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Shewanella decolorationis S12 RepID=V1DH26_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESE40330.1}; TaxID=1353536 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella decolorationis S12.;"
hypothetical protein
S1-18-all-fractions_k255_6114283_12
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10350..12065)
DNA (1716bp) protein (572aa)
Putative sensor protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UU13_PSEUP
putative sensor protein
Putative sensor protein {ECO:0000313|EMBL:AER57447.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
S1-18-all-fractions_k255_6114283_13
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

12413..12928
DNA (516bp) protein (172aa)
DNA damage-inducible protein DinB n=1 Tax=Schlesneria paludicola RepID=UPI00029A74B2
DinB family protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-18-all-fractions_k255_6114283_14
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12991..13938
DNA (948bp) protein (316aa)
xylose isomerase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003732AFC
xylose isomerase
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:ADZ79497.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
S1-18-all-fractions_k255_6114283_15
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(13904..15727)
DNA (1824bp) protein (608aa)
peptidyl-dipeptidase A (EC:3.4.15.1)
Peptidyl-dipeptidase A {ECO:0000313|EMBL:AGY58470.1}; EC=3.4.15.1 {ECO:0000313|EMBL:AGY58470.1};; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
Peptidyl-dipeptidase A n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QLC8_9CYAN
S1-18-all-fractions_k255_6114283_16
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(15981..16520)
DNA (540bp) protein (180aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-18-all-fractions_k255_6114283_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(16600..17031)
DNA (432bp) protein (144aa)
id=12555938 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_6114283_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(17028..17327)
DNA (300bp) protein (100aa)
hypothetical protein id=12555937 bin=CNBR_ACIDO species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_6114283_19
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(17373..18413)
DNA (1041bp) protein (347aa)
Mce family protein id=12555936 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Mce family protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-18-all-fractions_k255_6114283_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(18478..19335)
DNA (858bp) protein (286aa)
ABC transporter, ATPase subunit id=12555935 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
polyamine-transporting ATPase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_6114283_21
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(19341..20114)
DNA (774bp) protein (258aa)
transporter, putative ER-chloroplast lipid translocase (ECLT) family; K02066 putative ABC transport system permease protein id=12555934 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
protein of unknown function DUF140
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_6114283_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(20118..22139)
DNA (2022bp) protein (674aa)
uvrB; excinuclease ABC subunit B; K03702 excinuclease ABC subunit B id=12555933 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
uvrB; excinuclease ABC subunit B
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-18-all-fractions_k255_6114283_23
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(22255..23238)
DNA (984bp) protein (328aa)
von Willebrand factor type A n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPR0_9BACT
von Willebrand factor A
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-18-all-fractions_k255_6114283_24
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(23276..23440)
DNA (165bp) protein (55aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying 24 items

View Taxonomy