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S1-18-all-fractions_k255_3973781_5

Organism: S1-18-all-fractions_metab_42

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: comp(2792..4225)

Top 3 Functional Annotations

Value Algorithm Source
sigma-54 (RpoN); K03092 RNA polymerase sigma-54 factor id=12554063 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 479.0
  • Bit_score: 742
  • Evalue 1.70e-211
RNA polymerase sigma54 factor similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 484.0
  • Bit_score: 443
  • Evalue 5.90e-122
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 478.0
  • Bit_score: 835
  • Evalue 2.00e-239

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Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1434
ATGGCGATTTCGCAGAAACTTCACACCAAGCTCGTTCAGAAGCTCATTCTGACGCCGTCGCTGCAGCAGGCGATCAAGCTGCTGCCGATGTCGACGCTGGAGCTGTCCGATCTCCTCAACCAGGAGATGGTCGAGAACCCGCTGCTCGAAGAGATTCCCACCGAGGACCTGCAGCAGACCGACGCCGCGGCCGCGGCCGAAAAGGCCGAAGCCGAGCAGCCCCAGAAGGCGGACAAGAGCGACAACTGGGACGACAGCGACTACGAGTACTTCTTTGGCGATTACCTCGATGACGGCTACCGCCCGCACGCGCCGCAGGAGGTGAAGGAACTGCCGCCGATCGAGAACACGCTCTCGACCGGCAGCTCGCTCACCGACCACCTGATGTGGCAGCTCTCACTGCAGACCAACGACGATCTGCTCCGCGAGATCGGCAGCGCGATTCTCGGTAACCTCGACGATGACGGGTACCTGGTAGCCTCGCTCGACGAGCTCGCCGGCATGGGCTCGTGGGAGCCCGCGGATGTGCAGCGGGCCCTCGCGCTGGTCCAGAGCTTCGACCCGATCGGCGTGGCCGCGCGCGACCTCCAGGAGTGCCTGCTGCTGCAGATCCGCCACCTCGGTCTCGAAGGCACGCCGACCGAAAAAATCGTTGGCGACCACCTGCGGCTGCTGCAGAACCATCAGGTGCCGGAAATCTCGCGCAAGCTCGGGATTCCGATCGAGGACTTGAAGGAGCACATCGAGGTGATCCGCCACCTCGATCCCAAACCGGGCAGCCGCTTCAACCCGACCCAGTCCCAGTACGTCATCCCCGACGTGTACGTCGTCAAGCTGGAGGATCAGTACGTCGCGCTGCTCAACGAGGACGGGCTGCCGCAGATGCGCATCAGCCCGGTGTATCGGCGCCTCCTCGACAAGAACACCGAGAACAGCGACGAGACCCGCGCTTATGTGAAGGACAAGTTCCGCTCGGCGCTCTGGTTGATCAAGTCCGTCGAGCAGCGTCAGAAGACCATTCACAAGGTCGCCACCAGCATCATCAATTTCCAGAAGGACTTCCTCGATCACGGCATCGAGCACCTCCGTCCACTGGTGCTCCGCGACGTTGCCAACGATATCGGCATGCACGAATCGACCGTCAGCCGCGTCGTGACGAACAAGTACATGCACACGCCGCAGGGCGTGTTCGAGATGAAGTACTTCTTCCACAGCGGGATCAGCAGTTCCTATGGCGAGAGCGTCTCGTCGGTAACGATCAAGCAGCGGATTCGCAAGATCATCGAGGCGGAGGATCCGCGCAAGCCGCTGAGCGACTCGAAGATCGTCAGCATCCTGCAGCGCGAGGGGCTCGTGCTCGCGCGGCGCACCATCGCCAAGTACCGCGAAGAGCTGAAGATCCCGACCTCCAATCAACGGAAGGTCCTCTACTGA
PROTEIN sequence
Length: 478
MAISQKLHTKLVQKLILTPSLQQAIKLLPMSTLELSDLLNQEMVENPLLEEIPTEDLQQTDAAAAAEKAEAEQPQKADKSDNWDDSDYEYFFGDYLDDGYRPHAPQEVKELPPIENTLSTGSSLTDHLMWQLSLQTNDDLLREIGSAILGNLDDDGYLVASLDELAGMGSWEPADVQRALALVQSFDPIGVAARDLQECLLLQIRHLGLEGTPTEKIVGDHLRLLQNHQVPEISRKLGIPIEDLKEHIEVIRHLDPKPGSRFNPTQSQYVIPDVYVVKLEDQYVALLNEDGLPQMRISPVYRRLLDKNTENSDETRAYVKDKFRSALWLIKSVEQRQKTIHKVATSIINFQKDFLDHGIEHLRPLVLRDVANDIGMHESTVSRVVTNKYMHTPQGVFEMKYFFHSGISSSYGESVSSVTIKQRIRKIIEAEDPRKPLSDSKIVSILQREGLVLARRTIAKYREELKIPTSNQRKVLY*