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S1-18-all-fractions_k255_3973781

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_3973781_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..150)
DNA (150bp) protein (50aa)
PTS system transporter subunit IIA (EC:2.7.1.69); K02793 PTS system, mannose-specific IIA component [EC:2.7.1.69] id=12554067 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
PTS system transporter subunit IIA (EC:2.7.1.69)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_3973781_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(310..1236)
DNA (927bp) protein (309aa)
putative P-loop-containing kinase; K06958 UPF0042 nucleotide-binding protein id=12554066 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-18-all-fractions_k255_3973781_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1238..2239)
DNA (1002bp) protein (334aa)
HPr kinase; K06023 HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] id=12554065 bin=CNBR_ACIDO species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
HPr kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-18-all-fractions_k255_3973781_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(2251..2790)
DNA (540bp) protein (180aa)
Protein DR_1082 n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MES2_9BACT
protein DR_1082
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_3973781_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2792..4225)
DNA (1434bp) protein (478aa)
sigma-54 (RpoN); K03092 RNA polymerase sigma-54 factor id=12554063 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RNA polymerase sigma54 factor
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-18-all-fractions_k255_3973781_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(4264..4989)
DNA (726bp) protein (242aa)
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily id=12554062 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-18-all-fractions_k255_3973781_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(4990..7182)
DNA (2193bp) protein (731aa)
id=12554061 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_3973781_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(7375..9159)
DNA (1785bp) protein (595aa)
single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] id=12554060 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
single-stranded-DNA-specific exonuclease RecJ
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-18-all-fractions_k255_3973781_9
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(9159..10133)
DNA (975bp) protein (325aa)
accA; acetyl-CoA carboxylase, carboxyl transferase subunit alpha; K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] id=12554059 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
acetyl-CoA carboxylase, carboxyl transferase subunit alpha
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-18-all-fractions_k255_3973781_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(10231..11565)
DNA (1335bp) protein (445aa)
DNA polymerase III, alpha subunit; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] id=12554058 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA polymerase III subunit alpha
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying 10 items

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