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S1-18-all-fractions_k255_6454348

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_6454348_1
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..950
DNA (948bp) protein (316aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056850};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Nocardioides sp. CF8 RepID=R7Y2C6_9ACTO
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
S1-18-all-fractions_k255_6454348_2
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(993..2192)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7Y1K3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON25413.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
S1-18-all-fractions_k255_6454348_3
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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2318..2953
DNA (636bp) protein (212aa)
Beta-lactamase domain-containing protein n=1 Tax=Nocardioides sp. CF8 RepID=R7Y1F2_9ACTO
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:EON25414.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
beta-lactamase domain-containing protein
S1-18-all-fractions_k255_6454348_4
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2963..4204)
DNA (1242bp) protein (414aa)
Isochorismate synthase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SE23_NOCSJ
isochorismate synthase
Isochorismate synthase {ECO:0000313|EMBL:ABL80058.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S1-18-all-fractions_k255_6454348_5
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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4325..5506
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MEA3_9ACTO
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EFC83377.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
AMP-dependent synthetase/ligase
S1-18-all-fractions_k255_6454348_6
Streptomyces sp. RSD-27, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5657..6907
DNA (1251bp) protein (417aa)
AMP-dependent synthetase {ECO:0000313|EMBL:KIF05821.1}; TaxID=1571774 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. RSD-27.;"
AMP-dependent synthetase and ligase
S1-18-all-fractions_k255_6454348_7
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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7009..7374
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Frankia sp. QA3 RepID=I8QZT2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EIV96074.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
hypothetical protein
S1-18-all-fractions_k255_6454348_8
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7442..8458)
DNA (1017bp) protein (339aa)
Peptidoglycan binding domain-containing protein n=1 Tax=Nocardioides sp. CF8 RepID=R7Y1H8_9ACTO
Peptidoglycan binding domain-containing protein {ECO:0000313|EMBL:EON25416.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
peptidoglycan-binding domain protein
S1-18-all-fractions_k255_6454348_9
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8605..9249
DNA (645bp) protein (215aa)
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase (EC:2.1.1.-)
Demethylmenaquinone methyltransferase {ECO:0000255|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000255|HAMAP-Rule:MF_01813};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Demethylmenaquinone methyltransferase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=UBIE_NOCSJ
S1-18-all-fractions_k255_6454348_10
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9446..9805
DNA (360bp) protein (120aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
NADH-quinone oxidoreductase subunit A n=1 Tax=Nocardioides sp. CF8 RepID=R7Y1K8_9ACTO
nuoA1; putative NADH-quinone oxidoreductase subunit A
S1-18-all-fractions_k255_6454348_11
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9815..10369
DNA (555bp) protein (185aa)
NADH dehydrogenase subunit B (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit B {ECO:0000255|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000255|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000255|HAMAP-Rule:MF_01356}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
NADH-quinone oxidoreductase subunit B n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=NUOB_NOCSJ
S1-18-all-fractions_k255_6454348_12
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10366..11187
DNA (822bp) protein (274aa)
NADH dehydrogenase subunit C (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit C {ECO:0000255|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000255|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000255|HAMAP-Rule:MF_01357}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
NADH-quinone oxidoreductase subunit C n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=NUOC_NOCSJ
S1-18-all-fractions_k255_6454348_13
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11187..12527
DNA (1341bp) protein (447aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
NADH dehydrogenase subunit D (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit D n=1 Tax=Nocardioides sp. CF8 RepID=R7Y1I3_9ACTO
S1-18-all-fractions_k255_6454348_14
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12524..13192
DNA (669bp) protein (223aa)
NADH dehydrogenase subunit E (EC:1.6.5.3)
NADH dehydrogenase subunit E n=1 Tax=Nocardioides sp. CF8 RepID=R7Y1C7_9ACTO
NADH dehydrogenase subunit E {ECO:0000313|EMBL:EON25422.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
S1-18-all-fractions_k255_6454348_15
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13185..13823
DNA (639bp) protein (213aa)
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5)
NADH dehydrogenase subunit F {ECO:0000313|EMBL:ABL80067.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ABL80067.1};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
NADH dehydrogenase subunit F n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SE32_NOCSJ
Displaying 15 items

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