ggKbase home page

S2-16-all-fractions_k255_23811

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S2-16-all-fractions_k255_23811_1
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..1944
DNA (1944bp) protein (648aa)
Penicillin-binding protein transpeptidase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EXM0_MODMB
penicillin-binding protein transpeptidase
Penicillin-binding protein transpeptidase {ECO:0000313|EMBL:CCH88133.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
S2-16-all-fractions_k255_23811_2
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1949..2938)
DNA (990bp) protein (330aa)
Cell wall actin-like component MreB, Rod shaping protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EXL9_MODMB
mreB; cell wall actin-like component MreB, Rod shaping protein
Cell wall actin-like component MreB, Rod shaping protein {ECO:0000313|EMBL:CCH88132.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
S2-16-all-fractions_k255_23811_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3274..3543)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJZ2_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27017.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
S2-16-all-fractions_k255_23811_4
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3852..4136
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Frankia sp. BMG5.12 RepID=UPI000376AA1B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJT69046.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
S2-16-all-fractions_k255_23811_5
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4590..5150)
DNA (561bp) protein (187aa)
Protoporphyrinogen oxidase n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4T470_AMYOR
hemG; protoporphyrinogen oxidase
Protoporphyrinogen oxidase {ECO:0000313|EMBL:AGM07221.1}; TaxID=1156913 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
S2-16-all-fractions_k255_23811_6
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5263..6393)
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6B2AE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK34054.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
S2-16-all-fractions_k255_23811_7
unknown

Not on your lists

comp(6506..6595)
DNA (90bp) protein (30aa)

This feature has no annotations

S2-16-all-fractions_k255_23811_8
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6988..7491
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YY22_NOCFA
Uncharacterized protein {ECO:0000313|EMBL:KJE22492.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
hypothetical protein
S2-16-all-fractions_k255_23811_9
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7527..7931
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SCF8_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB76286.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S2-16-all-fractions_k255_23811_10
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8049..8636)
DNA (588bp) protein (196aa)
HNH endonuclease n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SFZ8_GEOOG
HNH endonuclease
HNH endonuclease {ECO:0000313|EMBL:ADB74903.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S2-16-all-fractions_k255_23811_11
unknown

Not on your lists

comp(9000..9182)
DNA (183bp) protein (61aa)

This feature has no annotations

S2-16-all-fractions_k255_23811_12
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10016..11602
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X8P8_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EHR51417.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
hypothetical protein
S2-16-all-fractions_k255_23811_13
unknown

Not on your lists

11712..11870
DNA (159bp) protein (53aa)

This feature has no annotations

S2-16-all-fractions_k255_23811_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11928..12128)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJV8_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26983.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
S2-16-all-fractions_k255_23811_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12132..12395)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJV8_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26983.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
S2-16-all-fractions_k255_23811_16
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12657..13325
DNA (669bp) protein (223aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LS81_ACIC1
LuxR family transcriptional regulator {ECO:0000313|EMBL:KGH47562.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
two component LuxR family transcriptional regulator
S2-16-all-fractions_k255_23811_17
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13393..15114)
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI0003641505
Uncharacterized protein {ECO:0000313|EMBL:KGH47563.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
GAF sensor signal transduction histidine kinase
S2-16-all-fractions_k255_23811_18
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15192..15617)
DNA (426bp) protein (142aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A3H1_THECD
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:ACY96096.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
S2-16-all-fractions_k255_23811_19
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15744..16400)
DNA (657bp) protein (219aa)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2NTB7_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:KGH46351.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
hypothetical protein
S2-16-all-fractions_k255_23811_20
Streptomyces lividans, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16762..17496
DNA (735bp) protein (245aa)
Universal stress protein n=2 Tax=Streptomyces lividans RepID=S1S0K6_STRLI
stress-inducible protein
Stress-inducible protein {ECO:0000313|EMBL:AIJ18124.1}; TaxID=457428 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lividans TK24.;"
S2-16-all-fractions_k255_23811_21
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17520..18515
DNA (996bp) protein (332aa)
Zinc-binding alcohol dehydrogenase family protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XGL2_NAKMY
zinc-binding alcohol dehydrogenase
Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:ACV78195.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
S2-16-all-fractions_k255_23811_22
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18582..19049
DNA (468bp) protein (156aa)
TrkA-C domain protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7H2_GEOOG
TrkA-C domain-containing protein
TrkA-C domain protein {ECO:0000313|EMBL:ADB75431.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S2-16-all-fractions_k255_23811_23
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19058..20239
DNA (1182bp) protein (394aa)
Sodium/hydrogen exchanger n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7H1_GEOOG
sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ADB75430.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S2-16-all-fractions_k255_23811_24
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20265..21116)
DNA (852bp) protein (284aa)
Membrane dipeptidase (EC:3.4.13.19)
Membrane dipeptidase {ECO:0000313|EMBL:ADB75118.1}; EC=3.4.13.19 {ECO:0000313|EMBL:ADB75118.1};; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
Membrane dipeptidase n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S4C8_GEOOG
Displaying 24 items

View Taxonomy