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S2-16-all-fractions_k255_36273

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S2-16-all-fractions_k255_36273_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2..3892
DNA (3891bp) protein (1297aa)
DNA-directed RNA polymerase, subunit beta-prime; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=12555594 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA-directed RNA polymerase subunit beta-prime
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S2-16-all-fractions_k255_36273_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4061..4543
DNA (483bp) protein (161aa)
DoxX family protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XUP1_SORCE
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:AGP36917.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
S2-16-all-fractions_k255_36273_3
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4554..4940
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CFII64 RepID=S6HAG1_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KFE47446.1}; TaxID=317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae.;"
hypothetical protein
S2-16-all-fractions_k255_36273_4
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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4966..5568
DNA (603bp) protein (201aa)
HD domain protein n=1 Tax=Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 RepID=U2LHN4_TRESO
HD domain protein {ECO:0000313|EMBL:ERF61020.1}; TaxID=1125725 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536.;"
hypothetical protein
S2-16-all-fractions_k255_36273_5
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(5611..6201)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000344AA39
protein of unknown function DUF1211
Tax=RBG_13_Acidobacteria_68_16_curated
S2-16-all-fractions_k255_36273_6
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6360..6908
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370F938
1,4-beta-xylanase
1,4-beta-xylanase {ECO:0000313|EMBL:AKD53887.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
S2-16-all-fractions_k255_36273_7
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6917..7285
DNA (369bp) protein (123aa)
Endo-1,4-beta-xylanase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PHI6_CHIPD
1,4-beta-xylanase
1,4-beta-xylanase {ECO:0000313|EMBL:AKD53887.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
S2-16-all-fractions_k255_36273_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

7691..8458
DNA (768bp) protein (256aa)
protein phosphatase 2C-like protein; K01090 protein phosphatase [EC:3.1.3.16] id=12557201 bin=CNBR_ACIDO species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
protein serine/threonine phosphatase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_36273_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

8455..9606
DNA (1152bp) protein (384aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] id=12557202 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
protein kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_36273_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

9603..10496
DNA (894bp) protein (298aa)
FHA domain-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJN7_SINAD
FHA domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_36273_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

10504..10806
DNA (303bp) protein (101aa)
FHA domain-containing protein n=1 Tax=Micrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230) RepID=C5CAI6_MICLC
FHA domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_36273_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

10818..12647
DNA (1830bp) protein (610aa)
cag pathogenicity island protein Cag6 n=1 Tax=Methyloversatilis universalis RepID=UPI000376D9E2
protein kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_36273_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

12644..14158
DNA (1515bp) protein (505aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_36273_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

14188..16365
DNA (2178bp) protein (726aa)
PEGA domain protein n=1 Tax=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) RepID=A8F483_THELT
PEGA domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S2-16-all-fractions_k255_36273_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


16705..17130
DNA (426bp) protein (142aa)
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=12555583 bin=CNBR_ACIDO species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsL; 30S ribosomal protein S12
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_36273_16
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists


17149..17622
DNA (474bp) protein (158aa)
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 id=12555582 bin=CNBR_ACIDO species=Staphylococcus saprophyticus genus=Staphylococcus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
SSU ribosomal protein S7p (S5e)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S2-16-all-fractions_k255_36273_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

17734..19851
DNA (2118bp) protein (706aa)
fusA-3; translation elongation factor G; K02355 elongation factor G id=12555581 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
fusA-3; elongation factor G
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_36273_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

19901..20302
DNA (402bp) protein (134aa)
translation elongation factor Tu id=12555603 bin=CNBR_ACIDO species=Hyphomicrobium denitrificans genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
translation elongation factor Tu
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying 18 items

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