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S2-16-all-fractions_k255_2709868

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S2-16-all-fractions_k255_2709868_1
unknown

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3..104
DNA (102bp) protein (34aa)
PREDICTED: LOW QUALITY PROTEIN: phosphoenolpyruvate carboxylase 4-like n=1 Tax=Setaria italica RepID=UPI000350BF3E
S2-16-all-fractions_k255_2709868_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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430..3753
DNA (3324bp) protein (1108aa)
Cna B domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ND1_SOLUE
CnaB domain-containing protein
Cna B domain protein {ECO:0000313|EMBL:ABJ88839.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
S2-16-all-fractions_k255_2709868_3
uncultured planctomycete, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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3823..4725
DNA (903bp) protein (301aa)
Endo-1,4-beta-xylanase B n=1 Tax=uncultured planctomycete RepID=H5SAS2_9BACT
Endo-1,4-beta-xylanase B {ECO:0000313|EMBL:BAL53258.1}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
alpha/beta hydrolase
S2-16-all-fractions_k255_2709868_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(5147..7192)
DNA (2046bp) protein (682aa)
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Aquifex aeolicus (strain VF5) RepID=LEUC_AQUAE id=5224304 bin=16ft_combo_ws3_JS1 species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_2709868_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(7212..7454)
DNA (243bp) protein (81aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S2-16-all-fractions_k255_2709868_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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7792..8523
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000377C0BC
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_2709868_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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8631..9092
DNA (462bp) protein (154aa)
MutS2 protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HF24_9FIRM
MutS2 protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S2-16-all-fractions_k255_2709868_8
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(9348..11114)
DNA (1767bp) protein (589aa)
Phosphoribulokinase/uridine kinase id=2140430 bin=GWD2_Chloroflexi_49_16 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
phosphoribulokinase/uridine kinase family protein
Tax=RBG_16_Chloroflexi_63_12_curated
S2-16-all-fractions_k255_2709868_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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11331..12353
DNA (1023bp) protein (341aa)
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator id=12556044 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Methyltransferase type 11
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S2-16-all-fractions_k255_2709868_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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12450..13949
DNA (1500bp) protein (500aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] id=12556043 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Adenosylhomocysteinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S2-16-all-fractions_k255_2709868_11
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(14074..14538)
DNA (465bp) protein (155aa)
alias=16ft_combo_ws3_scaffold_1406_39 id=24505318 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S2-16-all-fractions_k255_2709868_12
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(14939..15784)
DNA (846bp) protein (282aa)
Methyltransferase type 12 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TPD8_9CHLR
Methyltransferase type 12 {ECO:0000313|EMBL:EFH87494.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
antibiotic biosynthesis protein LmbJ
S2-16-all-fractions_k255_2709868_13
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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comp(16430..19540)
DNA (3111bp) protein (1037aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00036D586F
CheA signal transduction histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S2-16-all-fractions_k255_2709868_14
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

19760..20710
DNA (951bp) protein (317aa)
id=12557554 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
GDSL-like lipase/acylhydrolase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S2-16-all-fractions_k255_2709868_15
Shewanella piezotolerans, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20855..21013)
DNA (159bp) protein (53aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R1J8_PIRSD
AhpC/Tsa family antioxidant
Antioxidant, AhpC/Tsa family {ECO:0000313|EMBL:ACJ27669.1}; TaxID=225849 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella piezotolerans (strain WP3 / JCM 13877).;"
S2-16-all-fractions_k255_2709868_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(21188..21526)
DNA (339bp) protein (113aa)
peroxiredoxin id=12555817 bin=CNBR_ACIDO species=Pusillimonas noertemannii genus=Pusillimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
alkyl hydroperoxide reductase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_2709868_17
Pseudomonas sp. EGD-AK9, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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21600..22139
DNA (540bp) protein (180aa)
GCN5 family N-acetyltransferase n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U2B5F7_9PSED
GCN5 family N-acetyltransferase {ECO:0000313|EMBL:ERI52227.1}; TaxID=1386078 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. EGD-AK9.;"
N-acetyltransferase GCN5
S2-16-all-fractions_k255_2709868_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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22139..24598
DNA (2460bp) protein (820aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] id=12554668 bin=CNBR_ACIDO species=Rhodopirellula europaea genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_2709868_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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24825..25694
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LGR2_SYNFM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_2709868_20
unknown

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comp(25755..26222)
DNA (468bp) protein (156aa)

This feature has no annotations

S2-16-all-fractions_k255_2709868_21
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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26517..28127
DNA (1611bp) protein (537aa)
hypothetical protein id=12554262 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_2709868_22
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(28280..30445)
DNA (2166bp) protein (722aa)
Glycosyl hydrolase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFE9_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying 22 items

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