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S2-16-all-fractions_k255_3669048

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S2-16-all-fractions_k255_3669048_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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3..923
DNA (921bp) protein (307aa)
signal transduction histidine kinase, nitrogen specific, NtrB id=12555763 bin=CNBR_ACIDO species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
gnfL; nitrogen fixation master sensor histidine kinase, PAS domain-containing
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S2-16-all-fractions_k255_3669048_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

940..2355
DNA (1416bp) protein (472aa)
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains id=12555762 bin=CNBR_ACIDO species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S2-16-all-fractions_k255_3669048_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(2383..3435)
DNA (1053bp) protein (351aa)
xerC; tyrosine recombinase XerC id=12555761 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
tyrosine recombinase XerC
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S2-16-all-fractions_k255_3669048_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3480..4970)
DNA (1491bp) protein (497aa)
hypothetical protein (EC:2.1.1.74); K04094 methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] id=12555760 bin=CNBR_ACIDO species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
tRNA (uracil-5-)-methyltransferase Gid (EC:2.1.1.74)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S2-16-all-fractions_k255_3669048_5
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(5101..7833)
DNA (2733bp) protein (911aa)
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Thermosynechococcus elongatus (strain BP-1) RepID=Q8DHR4_THEEB
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S2-16-all-fractions_k255_3669048_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(7855..8925)
DNA (1071bp) protein (357aa)
smf; protein Smf; K04096 DNA processing protein id=12555758 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
smf; protein Smf
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S2-16-all-fractions_k255_3669048_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

9218..9571
DNA (354bp) protein (118aa)
TPR Domain containing protein id=12555757 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S2-16-all-fractions_k255_3669048_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

9540..10532
DNA (993bp) protein (331aa)
id=12555756 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_3669048_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


10625..10984
DNA (360bp) protein (120aa)
rplU; 50S ribosomal protein L21 id=12555755 bin=CNBR_ACIDO species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rplU; 50S ribosomal protein L21
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_3669048_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


11105..11380
DNA (276bp) protein (92aa)
rpmA; 50S ribosomal protein L27 id=12555754 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpmA; 50S ribosomal protein L27
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_3669048_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

11453..12562
DNA (1110bp) protein (370aa)
obgE; GTPase ObgE; K03979 GTP-binding protein id=12555753 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Obg family GTPase CgtA
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S2-16-all-fractions_k255_3669048_12
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

12559..13029
DNA (471bp) protein (157aa)
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] id=12555752 bin=CNBR_ACIDO species=Pseudomonas mendocina genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nicotinate/nicotinamide nucleotide adenylyltransferase (EC:2.7.7.18)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Displaying 12 items

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