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S2-16-all-fractions_k255_3953711

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S2-16-all-fractions_k255_3953711_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2..394
DNA (393bp) protein (131aa)
malate dehydrogenase (NAD) (EC:1.1.1.37)
malate dehydrogenase; K00024 malate dehydrogenase [EC:1.1.1.37] id=12555280 bin=CNBR_ACIDO species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S2-16-all-fractions_k255_3953711_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(444..974)
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRA4_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40596.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
S2-16-all-fractions_k255_3953711_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(1011..1856)
DNA (846bp) protein (282aa)
arginase; K01476 arginase [EC:3.5.3.1] id=12556918 bin=CNBR_ACIDO species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rocF; arginase (EC:3.5.3.1)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_3953711_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(1926..2561)
DNA (636bp) protein (212aa)
putative O-methyltransferase id=12554767 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
O-methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S2-16-all-fractions_k255_3953711_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

2777..3466
DNA (690bp) protein (230aa)
phaF; poly(3-hydroxyalkanoate) granule-associated protein PhaF id=12556919 bin=CNBR_ACIDO species=Pseudomonas mandelii genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S2-16-all-fractions_k255_3953711_6
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

3472..4242
DNA (771bp) protein (257aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S2-16-all-fractions_k255_3953711_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

4435..5727
DNA (1293bp) protein (431aa)
hypothetical protein id=12556920 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
VWFA-related domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S2-16-all-fractions_k255_3953711_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(5730..6614)
DNA (885bp) protein (295aa)
type II R/M system modification methyltransferase; K00571 site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]; K00590 site-specific DNA-methyltransferase (cytosine-N4-specific) [EC:2.1.1.113] id=12556921 bin=CNBR_ACIDO species=Methanocaldococcus jannaschii genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA modification methylase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S2-16-all-fractions_k255_3953711_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(6661..6966)
DNA (306bp) protein (102aa)
id=12556922 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S2-16-all-fractions_k255_3953711_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7133..7726
DNA (594bp) protein (198aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S2-16-all-fractions_k255_3953711_11
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

7975..9066
DNA (1092bp) protein (364aa)
pbpG; PbpG; K07262 D-alanyl-D-alanine endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] id=12556923 bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
D-alanyl-D-alanine carboxypeptidase family protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S2-16-all-fractions_k255_3953711_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(9167..10027)
DNA (861bp) protein (287aa)
Uncharacterized protein involved in formate dehydrogenase formation id=4960330 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S2-16-all-fractions_k255_3953711_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

10236..10568
DNA (333bp) protein (111aa)
thioredoxin n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00036A4C43
thioredoxin
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_3953711_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

10565..11524
DNA (960bp) protein (320aa)
trxB; thioredoxin-disulfide reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] id=12556926 bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
trxB; thioredoxin reductase, FAD/NAD(P)-binding (EC:1.8.1.9)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_3953711_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(11562..12665)
DNA (1104bp) protein (368aa)
tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] id=12556927 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
thiouridylase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_3953711_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12662..13825)
DNA (1164bp) protein (388aa)
class V aminotransferase; K04487 cysteine desulfurase [EC:2.8.1.7] id=12556928 bin=CNBR_ACIDO species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
iscS; cysteine desulfurase (EC:2.8.1.7)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S2-16-all-fractions_k255_3953711_17
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

13991..14551
DNA (561bp) protein (187aa)
hypothetical protein id=12556929 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S2-16-all-fractions_k255_3953711_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

14657..15373
DNA (717bp) protein (239aa)
id=12556930 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S2-16-all-fractions_k255_3953711_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

15580..16797
DNA (1218bp) protein (406aa)
acyl-CoA dehydrogenase domain-containing protein id=24458148 bin=RBG_19FT_COMBO_GAL15_69_19 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_3953711_20
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

16854..17852
DNA (999bp) protein (333aa)
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11); K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11] id=14627513 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11)
Tax=CSP1_6_Rokubacteria
S2-16-all-fractions_k255_3953711_21
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

17860..19128
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI0003765301
major facilitator superfamily MFS_1
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_3953711_22
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(19137..20432)
DNA (1296bp) protein (432aa)
sodium/hydrogen exchanger id=14632066 bin=bin9_gal15 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
sodium/hydrogen exchanger
Tax=RBG_16_Chloroflexi_57_9_curated
S2-16-all-fractions_k255_3953711_23
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

20516..21154
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI000375B796
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Displaying 23 items

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