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S2-16-all-fractions_k255_4939445

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S2-16-all-fractions_k255_4939445_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

2..883
DNA (882bp) protein (294aa)
protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF id=12556591 bin=CNBR_ACIDO species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
protein-export membrane protein SecF
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S2-16-all-fractions_k255_4939445_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

924..1769
DNA (846bp) protein (282aa)
undecaprenyl-diphosphatase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] id=12556590 bin=CNBR_ACIDO species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
undecaprenyl-diphosphatase (EC:3.6.1.27)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S2-16-all-fractions_k255_4939445_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1777..2511
DNA (735bp) protein (245aa)
hypothetical protein id=12556589 bin=CNBR_ACIDO species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S2-16-all-fractions_k255_4939445_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

2608..5133
DNA (2526bp) protein (842aa)
K(+)-insensitive pyrophosphate-energized proton pump id=3585892 bin=GWF2_Methylomirabilis_70_14 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hppA; membrane-bound proton-translocating pyrophosphatase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S2-16-all-fractions_k255_4939445_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

5392..6117
DNA (726bp) protein (242aa)
TonB-like protein; K03832 periplasmic protein TonB id=12556587 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
TonB family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_4939445_6
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

6156..6842
DNA (687bp) protein (229aa)
MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB id=12556586 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
MotA/TolQ/ExbB proton channel
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S2-16-all-fractions_k255_4939445_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

6907..7347
DNA (441bp) protein (147aa)
TolR protein; K03560 biopolymer transport protein TolR id=12556585 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
biopolymer transport protein ExbD/TolR
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S2-16-all-fractions_k255_4939445_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

7347..7859
DNA (513bp) protein (171aa)
biopolymer transport protein ExbD/TolR; K03560 biopolymer transport protein TolR id=12556584 bin=CNBR_ACIDO species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
transport energizing protein TolR
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_4939445_9
unknown

Not on your lists

8072..8272
DNA (201bp) protein (67aa)
protein kinase
S2-16-all-fractions_k255_4939445_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8266..10086
DNA (1821bp) protein (607aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] id=12557219 bin=CNBR_ACIDO species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S2-16-all-fractions_k255_4939445_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(10139..11056)
DNA (918bp) protein (306aa)
hypothetical protein id=12555355 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
curli production assembly/transport component CsgG
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S2-16-all-fractions_k255_4939445_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(11340..12305)
DNA (966bp) protein (322aa)
tetratricopeptide repeat protein id=12556583 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S2-16-all-fractions_k255_4939445_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

12535..14691
DNA (2157bp) protein (719aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] id=12556582 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
(p)ppGpp synthetase SpoT/RelA
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_4939445_14
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(14780..15166)
DNA (387bp) protein (129aa)
Putative endoribonuclease L-PSP n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NKK9_ROSCS
endoribonuclease L-PSP
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:ABU58029.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
S2-16-all-fractions_k255_4939445_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


comp(15173..15364)
DNA (192bp) protein (64aa)
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 id=12556580 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpmB; 50S ribosomal protein L28
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_4939445_16
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(15452..16111)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000372D053
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S2-16-all-fractions_k255_4939445_17
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

16318..16905
DNA (588bp) protein (196aa)
Putative uncharacterized protein id=4007688 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S2-16-all-fractions_k255_4939445_18
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

17390..17842
DNA (453bp) protein (151aa)
DnaK suppressor protein; K06204 DnaK suppressor protein id=12556579 bin=CNBR_ACIDO species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dksA; DnaK suppressor protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S2-16-all-fractions_k255_4939445_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

17951..20386
DNA (2436bp) protein (812aa)
ATP-dependent protease La; K01338 ATP-dependent Lon protease [EC:3.4.21.53] id=12556578 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ATP-dependent protease La
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S2-16-all-fractions_k255_4939445_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(20513..21049)
DNA (537bp) protein (179aa)
NUDIX hydrolase; K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13] id=12556577 bin=CNBR_ACIDO species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
NUDIX domain. (EC:3.6.1.13)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_4939445_21
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(21100..22056)
DNA (957bp) protein (319aa)
rluD; ribosomal large subunit pseudouridine synthase D (EC:4.2.1.70); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] id=12556576 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
pseudouridine synthase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S2-16-all-fractions_k255_4939445_22
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(22062..22730)
DNA (669bp) protein (223aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] id=12556575 bin=CNBR_ACIDO species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
prolipoprotein diacylglyceryl transferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying 22 items

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