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S2-16-all-fractions_k255_1890793_1

Organism: S2-16-all-fractions_metab_conc_50

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 9 / 38
Location: comp(3..872)

Top 3 Functional Annotations

Value Algorithm Source
sigma 38, RpoS; K03086 RNA polymerase primary sigma factor id=12556622 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 290.0
  • Bit_score: 368
  • Evalue 5.10e-99
sigma 38, RpoS similarity KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 302.0
  • Bit_score: 263
  • Evalue 6.60e-68
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 294.0
  • Bit_score: 432
  • Evalue 3.10e-118

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Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 870
TTGTCGATTGAGGACAAGTACGACGAGGTACGACAGCTGGTCAACATCGGCAAGGAGAAAGGCTACTTGCTGTACGACGAGGTCAACGAACTGCTGCCCTCGGAGATCACCTCGTCGGAAGAGCTGGACGATCTGTTCAACACCTTCGGCAGCGCGGGCATCGAGGTGCTCGACGCGGATCAGATGAAGTTCCGCGACGAGAAGACGTTCGATCGCACCGCCGAGGGTAGCGAGGAGATTGAGCTCGACCTCACGCCGGGCGCGCTCGACAAGACGAACGATCCCGTCCGGATGTATCTGCGCGAGATGGGCACTGTGCCGCTGCTCACGCGCGAGGGTGAAGTCGAGATTGCCCGCCGCATCGAGCGTGGAAAGCTGTCGGTCATCAAATCCATCTCCCGCACGCCGATGGTCACCCGGAAGGTGATCCAGCTCGGCGACGACCTGAAGGCCGAGGAGCGGACGGTTCGTGAGCTGGTGACCTTCTCGGACGATGAGCTCACGGAAGACAAGCTCGAGGACCGCAAGCGCGAAGTACTGCGGCAGGTCGATGCGGTCCGCAAGGCCCGCGTCACCATGCAGAAGGCCGAGGAGAAGCTCGTCGACATCCCCAAGAAGGACAAGAAGAAGCACCGCAAGTACCGCTGGAAGATGCTGCGGTGCCGGGTCGAGCTCTCGCGGCGCATCCGCGACATCGAGTTCACGGAGATCGTCAAGCGCCGCCTCATCGAGGAGATCAAGGACCAGGTCGAATCGGTGCAGCGCGTGCAGCGCGAGATTGATGCGATCGAGCGGCAGCTCAATCCGAAGAACAAGCGCCAGAAGGTGAAGGAAGAGGACCGCAAGAACCTGCTCAAGCGCCAGAAGGAT
PROTEIN sequence
Length: 290
LSIEDKYDEVRQLVNIGKEKGYLLYDEVNELLPSEITSSEELDDLFNTFGSAGIEVLDADQMKFRDEKTFDRTAEGSEEIELDLTPGALDKTNDPVRMYLREMGTVPLLTREGEVEIARRIERGKLSVIKSISRTPMVTRKVIQLGDDLKAEERTVRELVTFSDDELTEDKLEDRKREVLRQVDAVRKARVTMQKAEEKLVDIPKKDKKKHRKYRWKMLRCRVELSRRIRDIEFTEIVKRRLIEEIKDQVESVQRVQREIDAIERQLNPKNKRQKVKEEDRKNLLKRQKD