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S2-16-all-fractions_k255_1890793

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S2-16-all-fractions_k255_1890793_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(3..872)
DNA (870bp) protein (290aa)
sigma 38, RpoS; K03086 RNA polymerase primary sigma factor id=12556622 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
sigma 38, RpoS
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S2-16-all-fractions_k255_1890793_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(936..2711)
DNA (1776bp) protein (592aa)
DNA primase catalytic subunit (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] id=12556621 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA primase catalytic subunit (EC:2.7.7.-)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S2-16-all-fractions_k255_1890793_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(2711..5167)
DNA (2457bp) protein (819aa)
Smr protein/MutS2; K07456 DNA mismatch repair protein MutS2 id=12556620 bin=CNBR_ACIDO species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
MutS2 family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_1890793_4
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(5303..6088)
DNA (786bp) protein (262aa)
NCAIR mutase-like protein; K06898 id=12556619 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S2-16-all-fractions_k255_1890793_5
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

6181..7680
DNA (1500bp) protein (500aa)
glycosyl transferase family protein id=12556618 bin=CNBR_ACIDO species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glycosyl transferase, family 2
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S2-16-all-fractions_k255_1890793_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

7693..8895
DNA (1203bp) protein (401aa)
aminotransferase (EC:2.6.1.-)
Putative aminotransferase n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SQB2_XANCT
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_1890793_7
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

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8837..9073
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QEH3_CATAD
hypothetical protein
Tax=BJP_IG2069_Chloroflexi_70_12
S2-16-all-fractions_k255_1890793_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(9168..9764)
DNA (597bp) protein (199aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029S3_SOLUE
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABJ82203.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
S2-16-all-fractions_k255_1890793_9
unknown

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9800..10474
DNA (675bp) protein (225aa)
hypothetical protein
S2-16-all-fractions_k255_1890793_10

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10644..13913
DNA (3270bp) protein (1090aa)
WD40 repeat-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DP20_SINAD
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49322.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
WD40 repeat-containing protein
S2-16-all-fractions_k255_1890793_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

13995..15143
DNA (1149bp) protein (383aa)
2-methylcitrate synthase/citrate synthase II; K01647 citrate synthase [EC:2.3.3.1] id=12556617 bin=CNBR_ACIDO species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
2-methylcitrate synthase/citrate synthase II
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S2-16-all-fractions_k255_1890793_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

15263..17065
DNA (1803bp) protein (601aa)
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA id=12556616 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lepA; GTP-binding protein LepA
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_1890793_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

17065..17763
DNA (699bp) protein (233aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] id=12556615 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lepB; signal peptidase I
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_1890793_14
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(17787..18413)
DNA (627bp) protein (209aa)
fcha; methenyltetrahydrofolate cyclohydrolase Fcha (EC:3.5.4.9) id=24411076 bin=RBG_19FT_COMBO_GAL15_69_19 species=Bacteroides xylanisolvens genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
formiminotransferase-cyclodeaminase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S2-16-all-fractions_k255_1890793_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(18458..19726)
DNA (1269bp) protein (423aa)
imidazolonepropionase; K01468 imidazolonepropionase [EC:3.5.2.7] id=24411077 bin=RBG_19FT_COMBO_GAL15_69_19 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
protein HutI
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_1890793_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(19802..20059)
DNA (258bp) protein (86aa)
hypothetical protein; K09131 hypothetical protein id=12556613 bin=CNBR_ACIDO species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_1890793_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(20224..20676)
DNA (453bp) protein (151aa)
Cell-division initiation protein DivIVA n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08N06_STIAD
divIVA; cell-division initiation protein DivIVA
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S2-16-all-fractions_k255_1890793_18
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(20673..21398)
DNA (726bp) protein (242aa)
PLP dependent enzymes class III-like protein; K06997 id=12556612 bin=CNBR_ACIDO species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
pyridoxal phosphate enzyme, YggS family
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S2-16-all-fractions_k255_1890793_19
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(21398..22384)
DNA (987bp) protein (329aa)
TPR repeat-containing protein id=12556611 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidase S1 and S6 chymotrypsin/Hap
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S2-16-all-fractions_k255_1890793_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(22491..24533)
DNA (2043bp) protein (681aa)
Rad3-related DNA helicase (EC:3.6.1.-); K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12] id=12556610 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
helicase c2
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_1890793_21
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(24565..25845)
DNA (1281bp) protein (427aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] id=12556609 bin=CNBR_ACIDO species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glyA; serine hydroxymethyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S2-16-all-fractions_k255_1890793_22
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(25887..26345)
DNA (459bp) protein (153aa)
rpiB; ribose-5-phosphate isomerase B (EC:5.3.1.6)
Putative sugar phosphate epimerase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z734_9ACTN
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_1890793_23
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

26517..27701
DNA (1185bp) protein (395aa)
SAM-dependent methyltransferase; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] id=12556607 bin=CNBR_ACIDO species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
S-adenosylmethionine-dependent methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_1890793_24
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

27723..28331
DNA (609bp) protein (203aa)
hypothetical protein id=14632936 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=CSP1_3_Armatimonadetes
S2-16-all-fractions_k255_1890793_25
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

28360..30090
DNA (1731bp) protein (577aa)
thiC; thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC id=12556604 bin=CNBR_ACIDO species=Actinomadura flavalba genus=Actinomadura taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
thiamine biosynthesis protein ThiC
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_1890793_26
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(30113..30322)
DNA (210bp) protein (70aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Displaying 26 items

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