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S3-16-all-fractions_k255_3772435

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-16-all-fractions_k255_3772435_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3..707)
DNA (705bp) protein (235aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCE7_CONWI
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ADB49420.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
S3-16-all-fractions_k255_3772435_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(704..3064)
DNA (2361bp) protein (787aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5B9_CONWI
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ADB50586.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
NADH:flavin oxidoreductase
S3-16-all-fractions_k255_3772435_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3061..4227)
DNA (1167bp) protein (389aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5B8_CONWI
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ADB50585.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
S3-16-all-fractions_k255_3772435_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(4224..4634)
DNA (411bp) protein (137aa)
Endoribonuclease L-PSP n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5B7_CONWI
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ADB50584.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
S3-16-all-fractions_k255_3772435_5
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4636..5463)
DNA (828bp) protein (276aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase {ECO:0000313|EMBL:AJK55394.1}; EC=4.2.1.17 {ECO:0000313|EMBL:AJK55394.1};; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
enoyl-CoA hydratase n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036DB888
S3-16-all-fractions_k255_3772435_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5460..6206)
DNA (747bp) protein (249aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5B5_CONWI
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB50582.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
S3-16-all-fractions_k255_3772435_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(6203..6406)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5A9_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB50576.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
S3-16-all-fractions_k255_3772435_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(6396..7754)
DNA (1359bp) protein (453aa)
phenylacetate--CoA ligase (EC:6.2.1.30)
Phenylacetate--CoA ligase {ECO:0000313|EMBL:ADB50577.1}; EC=6.2.1.30 {ECO:0000313|EMBL:ADB50577.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Phenylacetate--CoA ligase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5B0_CONWI
S3-16-all-fractions_k255_3772435_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

7828..8262
DNA (435bp) protein (145aa)
Thioesterase superfamily protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5B1_CONWI
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ADB50578.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
S3-16-all-fractions_k255_3772435_10
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8302..9180
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Nocardiopsis baichengensis RepID=UPI000344F941
repressor in the phenylacetic acid catabolism
Repressor in the phenylacetic acid catabolism {ECO:0000313|EMBL:CAM02415.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
S3-16-all-fractions_k255_3772435_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(9167..10102)
DNA (936bp) protein (312aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4K1_CONWI
alcohol dehydrogenase zinc-binding domain protein
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ADB52458.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
S3-16-all-fractions_k255_3772435_12
Rhodococcus sp. NCIMB12038, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10234..10920
DNA (687bp) protein (229aa)
Putative naphthalene degradation XylR-like regulator protein n=2 Tax=Rhodococcus RepID=Q0PET9_RHOOP
Putative naphthalene degradation regulator protein {ECO:0000313|EMBL:AAQ98843.1}; TaxID=92694 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. NCIMB12038.;"
narR2; putative naphthalene degradation regulatory protein
S3-16-all-fractions_k255_3772435_13
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10864..11559)
DNA (696bp) protein (232aa)
Naphthalene degradation GntR-like regulator protein n=2 Tax=Rhodococcus RepID=Q0PEU0_RHOOP
narR1; putative naphthalene degradation regulatory protein
Naphthalene degradation GntR-like regulator protein {ECO:0000313|EMBL:ABH01023.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
S3-16-all-fractions_k255_3772435_14
Bacillus sp. JF8, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11622..12413)
DNA (792bp) protein (264aa)
2-hydroxypent-2,4-dienoate hydratase n=2 Tax=Bacillaceae RepID=S5ZQG6_9BACI
nahL; 2-hydroxypent-2,4-dienoate hydratase
2-hydroxypent-2,4-dienoate hydratase {ECO:0000313|EMBL:BAD08309.1}; TaxID=209076 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. (strain JF8).;"
S3-16-all-fractions_k255_3772435_15
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(12415..13308)
DNA (894bp) protein (298aa)
Catechol 2,3-dioxygenase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L570_THERP
catechol 2,3-dioxygenase
Catechol 2,3-dioxygenase {ECO:0000313|EMBL:ACM06894.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
S3-16-all-fractions_k255_3772435_16
Rhodococcus sp. BCP1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13308..15155)
DNA (1848bp) protein (616aa)
electron transfer flavoprotein n=1 Tax=Rhodococcus ruber RepID=UPI00034DC86D
Electron transfer flavoprotein {ECO:0000313|EMBL:KDE09914.1}; TaxID=931223 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. BCP1.;"
electron transfer flavoprotein
S3-16-all-fractions_k255_3772435_17
Rhodococcus sp. BCP1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15160..15408)
DNA (249bp) protein (83aa)
rubredoxin n=1 Tax=Rhodococcus ruber RepID=UPI0003483CF3
Rubredoxin {ECO:0000256|RuleBase:RU003820}; TaxID=931223 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. BCP1.;"
rubA; rubredoxin
S3-16-all-fractions_k255_3772435_18
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15437..16171)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B651BD
Prolyl oligopeptidase family protein {ECO:0000313|EMBL:EIF31655.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
WD40-like beta Propeller containing protein
S3-16-all-fractions_k255_3772435_19
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16174..17229)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YQG8_BRASO
Uncharacterized protein {ECO:0000313|EMBL:GAJ28167.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
hypothetical protein
S3-16-all-fractions_k255_3772435_20
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17359..17625
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0MC40_ARTPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADX75096.1}; TaxID=930171 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG; 23796 / Sphe3).;"
S3-16-all-fractions_k255_3772435_21
Bacillus sp. JF8, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17631..18452
DNA (822bp) protein (274aa)
Biphenyl dihydrodiol dehydrogenase n=1 Tax=Bacillus sp. (strain JF8) RepID=Q7WZE9_BACPJ
hypothetical protein
Biphenyl dihydrodiol dehydrogenase {ECO:0000313|EMBL:BAC79228.1}; TaxID=209076 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. (strain JF8).;"
S3-16-all-fractions_k255_3772435_22
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18478..19542)
DNA (1065bp) protein (355aa)
sugar ABC transporter permease n=1 Tax=Rhodococcus opacus RepID=UPI00029CCC5C
Ribose transport system permease protein rbsC
Ribose transport system permease protein rbsC {ECO:0000313|EMBL:AHK29085.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
S3-16-all-fractions_k255_3772435_23
Streptomyces bottropensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19539..21044)
DNA (1506bp) protein (502aa)
ABC transporter ATP-binding protein n=1 Tax=Streptomyces bottropensis ATCC 25435 RepID=M3FZ38_9ACTO
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMF58375.1}; TaxID=1054862 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bottropensis ATCC 25435.;"
ABC transporter ATP-binding protein
S3-16-all-fractions_k255_3772435_24
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21044..22210)
DNA (1167bp) protein (389aa)
Ribose ABC transporter, periplasmic ribose-binding family protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7ESJ3_9ACTO
Ribose ABC transporter, periplasmic ribose-binding family protein {ECO:0000313|EMBL:ELP61977.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
hypothetical protein
S3-16-all-fractions_k255_3772435_25

Not on your lists

comp(22338..23630)
DNA (1293bp) protein (431aa)
phenylacetate--CoA ligase (EC:6.2.1.30)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036AC429
Putative phenylacetate-CoA ligase {ECO:0000313|EMBL:ACF98159.1}; TaxID=548899 species="Bacteria; environmental samples.;" source="uncultured bacterium 1116.;"
S3-16-all-fractions_k255_3772435_26
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23634..24620)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00037147D2
4Fe-4S ferredoxin
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
S3-16-all-fractions_k255_3772435_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24613..25620)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000363CB9B
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
S3-16-all-fractions_k255_3772435_28
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25707..26093
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0MC37_ARTPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADX75093.1}; TaxID=930171 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG; 23796 / Sphe3).;"
S3-16-all-fractions_k255_3772435_29
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26117..27538
DNA (1422bp) protein (474aa)
Naphthalene dioxygenase large subunit n=1 Tax=Rhodococcus opacus M213 RepID=K8XSG1_RHOOP
Naphthalene dioxygenase large subunit {ECO:0000313|EMBL:EKT84394.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
benA; terminal dioxygenase large subunit
S3-16-all-fractions_k255_3772435_30
Rhodococcus sp. P400, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27543..28058
DNA (516bp) protein (172aa)
Naphthalene dioxygenase small subunit n=2 Tax=Rhodococcus RepID=Q6TML9_9NOCA
narAb; naphthalene dioxygenase small subunit
Naphthalene dioxygenase small subunit {ECO:0000313|EMBL:AAR05107.1}; TaxID=251637 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. P400.;"
Displaying items 1-30 of 46 in total

View Taxonomy