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S3-16-all-fractions_k255_5567118

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-16-all-fractions_k255_5567118_1
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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2..172
DNA (171bp) protein (57aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S4A3_GEOOG
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB75093.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S3-16-all-fractions_k255_5567118_2
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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243..5771
DNA (5529bp) protein (1843aa)
Carbamoyl-phosphate synthase L chain ATP-binding protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S4A4_GEOOG
carbamoyl-phosphate synthase L chain ATP-binding protein
Carbamoyl-phosphate synthase L chain ATP-binding protein {ECO:0000313|EMBL:ADB75094.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S3-16-all-fractions_k255_5567118_3
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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5794..7758
DNA (1965bp) protein (655aa)
Beta-ketoacyl-acyl-carrier-protein synthase III {ECO:0000313|EMBL:ADB75095.1}; EC=2.3.1.180 {ECO:0000313|EMBL:ADB75095.1};; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
3-ketoacyl-ACP synthase III (EC:2.3.1.180)
Beta-ketoacyl-acyl-carrier-protein synthase III n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S4A5_GEOOG
S3-16-all-fractions_k255_5567118_4
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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7767..8627
DNA (861bp) protein (287aa)
Alpha/beta hydrolase fold protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S4A6_GEOOG
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADB75096.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S3-16-all-fractions_k255_5567118_5
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(8710..10452)
DNA (1743bp) protein (581aa)
Poly-beta-hydroxybutyrate polymerase domain protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S4B0_GEOOG
poly-beta-hydroxybutyrate polymerase domain-containing protein
Poly-beta-hydroxybutyrate polymerase domain protein {ECO:0000313|EMBL:ADB75100.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S3-16-all-fractions_k255_5567118_6
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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10644..11489
DNA (846bp) protein (282aa)
Anti-sigma-factor antagonist n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S4B2_GEOOG
anti-sigma-factor antagonist
Anti-sigma-factor antagonist {ECO:0000313|EMBL:ADB75102.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S3-16-all-fractions_k255_5567118_7
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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11486..12424
DNA (939bp) protein (313aa)
Putative anti-sigma regulatory factor, serine/threonine protein kinase n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S4B3_GEOOG
putative anti-sigma regulatory factor, serine/threonine protein kinase
Putative anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:ADB75103.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S3-16-all-fractions_k255_5567118_8
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(12544..13428)
DNA (885bp) protein (295aa)
Hydrolase, alpha/beta fold family n=2 Tax=Saccharopolyspora erythraea RepID=A4FJD5_SACEN
alpha/beta hydrolase
Hydrolase, alpha/beta fold family {ECO:0000313|EMBL:CAM04160.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
S3-16-all-fractions_k255_5567118_9
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(13558..14067)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S4B4_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB75104.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S3-16-all-fractions_k255_5567118_10
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(14291..15640)
DNA (1350bp) protein (450aa)
major facilitator transporter n=1 Tax=Nocardiopsis sp. CNS639 RepID=UPI0003786813
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADH66457.1}; Flags: Precursor;; TaxID=446468 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
S3-16-all-fractions_k255_5567118_11
Streptomyces ghanaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(15633..17309)
DNA (1677bp) protein (559aa)
Exoenzymes regulatory protein AepA n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=D5ZP59_9ACTO
Exoenzymes regulatory protein AepA {ECO:0000313|EMBL:EFE66292.2}; TaxID=566461 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ghanaensis ATCC 14672.;"
amidohydrolase
S3-16-all-fractions_k255_5567118_12
Streptomyces ghanaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(17321..19009)
DNA (1689bp) protein (563aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; TaxID=566461 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ghanaensis ATCC 14672.;"
ureC; urease subunit alpha (EC:3.5.1.5)
urease subunit alpha n=1 Tax=Streptomyces viridosporus RepID=UPI0002F99538
S3-16-all-fractions_k255_5567118_13
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(19006..19584)
DNA (579bp) protein (193aa)
Urease {ECO:0000256|SAAS:SAAS00108089}; EC=3.5.1.5 {ECO:0000256|SAAS:SAAS00108089};; TaxID=1380770 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="Streptomycetaceae bacterium MP113-05.;"
ureA; urease beta/gamma subunit (EC:3.5.1.5)
hypothetical protein n=1 Tax=Streptomyces viridosporus RepID=UPI0001AEFD94
S3-16-all-fractions_k255_5567118_14
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20157..21191
DNA (1035bp) protein (345aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
ABC transporter related protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7I3_GEOOG
ABC transporter
S3-16-all-fractions_k255_5567118_15
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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21188..21847
DNA (660bp) protein (220aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7I2_GEOOG
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADB75441.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S3-16-all-fractions_k255_5567118_16
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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21919..22737
DNA (819bp) protein (273aa)
Lipoprotein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7I1_GEOOG
NLPA lipoprotein
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S3-16-all-fractions_k255_5567118_17
unknown

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22852..23040
DNA (189bp) protein (63aa)

This feature has no annotations

S3-16-all-fractions_k255_5567118_18
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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23191..24576
DNA (1386bp) protein (462aa)
9-cis-epoxycarotenoid dioxygenase (EC:1.13.11.51)
9-cis-epoxycarotenoid dioxygenase {ECO:0000313|EMBL:ADB75155.1}; EC=1.13.11.51 {ECO:0000313|EMBL:ADB75155.1};; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
9-cis-epoxycarotenoid dioxygenase n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S4G5_GEOOG
S3-16-all-fractions_k255_5567118_19
unknown

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24684..24878
DNA (195bp) protein (65aa)

This feature has no annotations

S3-16-all-fractions_k255_5567118_20
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(25025..25228)
DNA (204bp) protein (68aa)
Cold-shock DNA-binding domain protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S497_GEOOG
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ADB75087.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S3-16-all-fractions_k255_5567118_21
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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25488..25739
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EWB1_MODMB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH87674.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
S3-16-all-fractions_k255_5567118_22
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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26036..26743
DNA (708bp) protein (236aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XF68_NAKMY
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACV77954.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Displaying 22 items

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