ggKbase home page

S3-16-all-fractions_k255_2442454

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-16-all-fractions_k255_2442454_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

3..338
DNA (336bp) protein (112aa)
icd; isocitrate/isopropylmalate dehydrogenase (EC:1.1.1.- 1.1.1.41)
Isocitrate/isopropylmalate dehydrogenase {ECO:0000313|EMBL:AFU59439.1}; EC=1.1.1.- {ECO:0000313|EMBL:AFU59439.1};; EC=1.1.1.41 {ECO:0000313|EMBL:AFU59439.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Isocitrate/isopropylmalate dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INI6_NITGG
S3-16-all-fractions_k255_2442454_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(349..885)
DNA (537bp) protein (179aa)
Putative N6 adenine-specific DNA methyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHL1_NITGG
N6 adenine-specific DNA methyltransferase
Putative N6 adenine-specific DNA methyltransferase {ECO:0000313|EMBL:AFU59440.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_2442454_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


comp(869..1582)
DNA (714bp) protein (238aa)
rsmA; ribosomal RNA small subunit methyltransferase A (EC:2.1.1.-)
Putative ribosomal RNA small subunit methyltransferase A {ECO:0000313|EMBL:AFU59441.1}; EC=2.1.1.- {ECO:0000313|EMBL:AFU59441.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative ribosomal RNA small subunit methyltransferase A n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDG2_NITGG
S3-16-all-fractions_k255_2442454_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(1622..2260)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILD6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59442.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_2442454_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(2292..2627)
DNA (336bp) protein (112aa)
Putative RNA polymerase Rpb4 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJP5_NITGG
rpb4; RNA polymerase Rpb4
Putative RNA polymerase Rpb4 {ECO:0000313|EMBL:AFU59443.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_2442454_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


comp(2624..2965)
DNA (342bp) protein (114aa)
50S ribosomal protein L21e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0INI7_NITGG
rpl21e; 50S ribosomal protein L21e
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_2442454_7
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(2998..3993)
DNA (996bp) protein (332aa)
DNA repair and recombination protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHL5_NITGG
radA3; DNA repair and recombination protein RadA
DNA repair and recombination protein RadA {ECO:0000313|EMBL:AIC17118.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
S3-16-all-fractions_k255_2442454_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

4121..4681
DNA (561bp) protein (187aa)
amoB; ammonia monooxygenase subunit B (EC:1.14.13.25)
Ammonia monooxygenase subunit B {ECO:0000313|EMBL:AFU59446.1}; EC=1.14.13.25 {ECO:0000313|EMBL:AFU59446.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Ammonia monooxygenase subunit B n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IDG6_NITGG
S3-16-all-fractions_k255_2442454_9

Not on your lists

comp(4816..5607)
DNA (792bp) protein (264aa)
cbiHC; precorrin-3B methylase (EC:2.1.1.- 5.4.1.-)
Precorrin-3B methylase n=1 Tax=uncultured archaeon RepID=I3RKW4_9ARCH
Precorrin-3B methylase {ECO:0000313|EMBL:AFK24974.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
S3-16-all-fractions_k255_2442454_10

Not on your lists

comp(5639..7051)
DNA (1413bp) protein (471aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
thrA; aspartokinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=uncultured archaeon RepID=I3RKW3_9ARCH
S3-16-all-fractions_k255_2442454_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(7059..7817)
DNA (759bp) protein (253aa)
DNA polymerase sliding clamp (Fragment) n=1 Tax=Candidatus Nitrososphaera gargensis RepID=D9ZB72_9ARCH
DNA polymerase sliding clamp {ECO:0000256|RuleBase:RU003673}; Flags: Fragment;; TaxID=497727 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
pcn; DNA polymerase sliding clamp
S3-16-all-fractions_k255_2442454_12
unknown

Not on your lists

7880..8074
DNA (195bp) protein (65aa)

This feature has no annotations

S3-16-all-fractions_k255_2442454_13

Not on your lists

comp(8371..8697)
DNA (327bp) protein (109aa)
rpoM; putative DNA-directed RNA polymerase subunit M (EC:2.7.7.6)
Putative transcription termination factor TFIIS n=1 Tax=uncultured archaeon RepID=I3RKW1_9ARCH
Putative transcription termination factor TFIIS {ECO:0000313|EMBL:AFK24971.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
S3-16-all-fractions_k255_2442454_14

Not on your lists

comp(8713..8991)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=uncultured archaeon RepID=I3RKW0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AFK24970.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpoL; DNA-directed RNA polymerase subunit L
S3-16-all-fractions_k255_2442454_15

Not on your lists

9049..9570
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=uncultured archaeon RepID=I3RKV9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AFK24969.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
S3-16-all-fractions_k255_2442454_16

Not on your lists

9609..10718
DNA (1110bp) protein (370aa)
Radical SAM domain-containing protein n=1 Tax=uncultured archaeon RepID=I3RKV8_9ARCH
Radical SAM domain-containing protein {ECO:0000313|EMBL:AFK24968.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
radical SAM domain-containing protein
S3-16-all-fractions_k255_2442454_17
unknown

Not on your lists

comp(10962..11102)
DNA (141bp) protein (47aa)

This feature has no annotations

S3-16-all-fractions_k255_2442454_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

11147..11698
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJL5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59393.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying 18 items

View Taxonomy