ggKbase home page

S3-16-all-fractions_k255_4369935

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-16-all-fractions_k255_4369935_1
uncultured marine crenarchaeote HF4000_APKG10D8, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

3..278
DNA (276bp) protein (92aa)
Putative bacterial regulatory protein, arsR family protein n=2 Tax=environmental samples RepID=B3TBF6_9ARCH
Putative bacterial regulatory protein, arsR family protein {ECO:0000313|EMBL:ABZ10001.1}; TaxID=455610 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000_APKG10D8.;"
AsnC family transcriptional regulator
S3-16-all-fractions_k255_4369935_2
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(933..1538)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILZ4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16461.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
S3-16-all-fractions_k255_4369935_3
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

1602..2105
DNA (504bp) protein (168aa)
Putative transcriptional regulator, MarR family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEP1_NITGG
putative transcriptional regulator, MarR family
Putative transcriptional regulator, MarR family {ECO:0000313|EMBL:AIC16460.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
S3-16-all-fractions_k255_4369935_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

2350..3063
DNA (714bp) protein (238aa)
Integrase family protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIR7_NITGG
integrase family protein
Integrase family protein {ECO:0000313|EMBL:AFU59840.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_4369935_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

3249..3824
DNA (576bp) protein (192aa)
Integrase family protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIR7_NITGG
integrase family protein
Integrase family protein {ECO:0000313|EMBL:AFU59840.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_4369935_6
unknown

Not on your lists

3877..4014
DNA (138bp) protein (46aa)

This feature has no annotations

S3-16-all-fractions_k255_4369935_7
unknown

Not on your lists

comp(4130..4321)
DNA (192bp) protein (64aa)

This feature has no annotations

S3-16-all-fractions_k255_4369935_8
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(4451..6901)
DNA (2451bp) protein (817aa)
Putative cell surface protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZXQ9_9ACTN
putative cell surface protein
Putative cell surface protein {ECO:0000313|EMBL:BAN01292.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
S3-16-all-fractions_k255_4369935_9
unknown

Not on your lists

7606..7791
DNA (186bp) protein (62aa)

This feature has no annotations

S3-16-all-fractions_k255_4369935_10
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7867..8781)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q1M2_KRIFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB32011.1}; Flags: Precursor;; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
S3-16-all-fractions_k255_4369935_11
unknown

Not on your lists

9313..9690
DNA (378bp) protein (126aa)

This feature has no annotations

S3-16-all-fractions_k255_4369935_12
unknown

Not on your lists

comp(9856..10086)
DNA (231bp) protein (77aa)

This feature has no annotations

S3-16-all-fractions_k255_4369935_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


comp(11166..14180)
DNA (3015bp) protein (1005aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Leucine--tRNA ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INH1_NITGG
S3-16-all-fractions_k255_4369935_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


comp(14183..16933)
DNA (2751bp) protein (917aa)
alaS; alanine--tRNA ligase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Alanine--tRNA ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHF9_NITGG
S3-16-all-fractions_k255_4369935_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(17030..17380)
DNA (351bp) protein (117aa)
Thioredoxin n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID95_NITGG
trxA2; thioredoxin
Thioredoxin {ECO:0000313|EMBL:AFU59366.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_4369935_16
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(17423..17584)
DNA (162bp) protein (54aa)
secE; protein translocase SecE subunit
Protein translocase SecE subunit {ECO:0000313|EMBL:AIC17276.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
hypothetical protein id=14427129 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
S3-16-all-fractions_k255_4369935_17
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(17658..18131)
DNA (474bp) protein (158aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJJ8_NITGG
putative transcriptional regulator, AsnC family
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:AIC17273.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
S3-16-all-fractions_k255_4369935_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

18317..18823
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INH2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59369.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_4369935_19
unknown

Not on your lists

comp(18865..19062)
DNA (198bp) protein (66aa)

This feature has no annotations

S3-16-all-fractions_k255_4369935_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

19424..19594
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDA0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59371.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_4369935_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

19922..20449
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INH3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59374.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_4369935_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

20422..21024
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHH3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59375.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_4369935_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(21021..21239)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDA4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59376.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_4369935_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

21291..21695
DNA (405bp) protein (135aa)
Putative ChaB family protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL95_NITGG
ChaB family protein
Putative ChaB family protein {ECO:0000313|EMBL:AFU59377.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_4369935_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(21692..22216)
DNA (525bp) protein (175aa)
leuD2; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
3-isopropylmalate dehydratase small subunit n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJK4_NITGG
S3-16-all-fractions_k255_4369935_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(22213..23490)
DNA (1278bp) protein (426aa)
leuC2; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INH4_NITGG
S3-16-all-fractions_k255_4369935_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

23611..24378
DNA (768bp) protein (256aa)
cofE2; F420-0:gamma-L-glutamate ligase (EC:6.3.2.-)
F420-0:gamma-L-glutamate ligase {ECO:0000313|EMBL:AFU59380.1}; EC=6.3.2.- {ECO:0000313|EMBL:AFU59380.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
F420-0:gamma-L-glutamate ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHH5_NITGG
S3-16-all-fractions_k255_4369935_28
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

24442..24996
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDA8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59381.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_4369935_29
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

25032..25571
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL97_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59382.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_4369935_30
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(25652..26113)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJK8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59383.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying items 1-30 of 34 in total

View Taxonomy