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S3-16-all-fractions_k255_4576306

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-16-all-fractions_k255_4576306_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3..143
DNA (141bp) protein (47aa)
nuoI; NADH-quinone oxidoreductase subunit I (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit I {ECO:0000313|EMBL:AFU58097.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AFU58097.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NADH-quinone oxidoreductase subunit I n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIY7_NITGG
S3-16-all-fractions_k255_4576306_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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136..693
DNA (558bp) protein (186aa)
nuoJ; NADH-quinone oxidoreductase subunit J (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit J {ECO:0000313|EMBL:AFU58098.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AFU58098.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NADH-quinone oxidoreductase subunit J n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGX3_NITGG
S3-16-all-fractions_k255_4576306_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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677..979
DNA (303bp) protein (101aa)
nuoK; NADH-quinone oxidoreductase subunit K (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit K {ECO:0000313|EMBL:AFU58099.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AFU58099.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NADH-quinone oxidoreductase subunit K n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMQ4_NITGG
S3-16-all-fractions_k255_4576306_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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995..2788
DNA (1794bp) protein (598aa)
nuoM; NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit M {ECO:0000313|EMBL:AFU58100.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AFU58100.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NADH-quinone oxidoreductase subunit M n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE98_NITGG
S3-16-all-fractions_k255_4576306_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2813..4897
DNA (2085bp) protein (695aa)
NADH-quinone oxidoreductase subunit L {ECO:0000313|EMBL:AFU58101.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AFU58101.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
nuoL; NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit L n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9U5_NITGG
S3-16-all-fractions_k255_4576306_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4920..6497
DNA (1578bp) protein (526aa)
nuoN; NADH-quinone oxidoreductase subunit N (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N {ECO:0000313|EMBL:AFU58102.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AFU58102.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NADH-quinone oxidoreductase subunit N n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIZ0_NITGG
S3-16-all-fractions_k255_4576306_7
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

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6725..7213
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=uncultured crenarchaeote 29d5 RepID=D4N6Z1_9CREN
Putative uncharacterized protein {ECO:0000313|EMBL:ACY24477.1}; TaxID=684057 species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
S3-16-all-fractions_k255_4576306_8
unknown

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comp(7541..7750)
DNA (210bp) protein (70aa)

This feature has no annotations

S3-16-all-fractions_k255_4576306_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7882..8103)
DNA (222bp) protein (74aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF82636.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
S3-16-all-fractions_k255_4576306_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8274..8702)
DNA (429bp) protein (143aa)
SUF system FeS cluster assembly protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE34_NITGG
nifU; SUF system FeS cluster assembly protein
SUF system FeS cluster assembly protein {ECO:0000313|EMBL:AFU58030.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_4576306_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8699..9949)
DNA (1251bp) protein (417aa)
sufS; cysteine desulfurase/selenocysteine lyase (EC:2.8.1.7)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Cysteine desulfurase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMM7_NITGG
S3-16-all-fractions_k255_4576306_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9954..10295)
DNA (342bp) protein (114aa)
Rieske [2Fe-2S] iron-sulfur domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGR4_NITGG
rieske [2Fe-2S] iron-sulfur domain-containing protein
Rieske [2Fe-2S] iron-sulfur domain-containing protein {ECO:0000313|EMBL:AFU58028.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_4576306_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(10318..11748)
DNA (1431bp) protein (477aa)
Putative FeS cluster assembly protein sufD n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIT6_NITGG
sufD; FeS cluster assembly protein sufD
Putative FeS cluster assembly protein sufD {ECO:0000313|EMBL:AFU58027.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_4576306_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(11791..13194)
DNA (1404bp) protein (468aa)
FeS cluster assembly protein SufB n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9N0_NITGG
sufB; FeS cluster assembly protein SufB
FeS cluster assembly protein SufB {ECO:0000313|EMBL:AFU58026.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_4576306_15
unknown

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comp(13371..13868)
DNA (498bp) protein (166aa)

This feature has no annotations

S3-16-all-fractions_k255_4576306_16
uncultured crenarchaeote, Crenarchaeota, Archaea

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14127..15476
DNA (1350bp) protein (450aa)
Putative glycosyl transferase group 1 n=1 Tax=uncultured crenarchaeote RepID=Q8NKN1_9CREN
Putative glycosyl transferase group 1 {ECO:0000313|EMBL:CAD42689.1}; TaxID=29281 species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
glycosyl transferase family protein
S3-16-all-fractions_k255_4576306_17
unknown

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comp(15789..16613)
DNA (825bp) protein (275aa)

This feature has no annotations

S3-16-all-fractions_k255_4576306_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(16902..17279)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE29_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58025.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_4576306_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(17309..17758)
DNA (450bp) protein (150aa)
nudF2; NUDIX hydrolase (EC:3.6.1.13)
Putative NUDIX hydrolase {ECO:0000313|EMBL:AFU58023.1}; EC=3.6.1.13 {ECO:0000313|EMBL:AFU58023.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative NUDIX hydrolase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGR0_NITGG
S3-16-all-fractions_k255_4576306_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(18116..19063)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9M5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58021.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_4576306_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

19203..20084
DNA (882bp) protein (294aa)
garR; 2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:AFU58020.1}; EC=1.1.1.60 {ECO:0000313|EMBL:AFU58020.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
2-hydroxy-3-oxopropionate reductase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE26_NITGG
S3-16-all-fractions_k255_4576306_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(20182..20544)
DNA (363bp) protein (121aa)
Putative methionine--tRNA ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGP6_NITGG
methionine--tRNA ligase
Putative methionine--tRNA ligase {ECO:0000313|EMBL:AFU58008.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_4576306_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(20828..21694)
DNA (867bp) protein (289aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; EC=4.2.1.136 {ECO:0000256|HAMAP-Rule:MF_01965};; ADP-dependent NAD(P)HX dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
ADP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIS0_NITGG
carbohydrate kinase
S3-16-all-fractions_k255_4576306_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(21874..23268)
DNA (1395bp) protein (465aa)
Cation diffusion facilitator family transporter n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE15_NITGG
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AFU58005.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_4576306_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(23476..24378)
DNA (903bp) protein (301aa)
Transcription initiation factor IIB n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE10_NITGG
tfb3; transcription initiation factor IIB
Transcription initiation factor IIB {ECO:0000313|EMBL:AFU58000.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_4576306_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(24749..25309)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGN3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57993.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_4576306_27
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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25358..26065
DNA (708bp) protein (236aa)
Putative translin family protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9G3_NITGG
putative RNA-binding protein of the translin family
Putative RNA-binding protein of the translin family {ECO:0000313|EMBL:AIF84676.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
S3-16-all-fractions_k255_4576306_28
unknown

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26339..26446
DNA (108bp) protein (36aa)

This feature has no annotations

S3-16-all-fractions_k255_4576306_29
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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26856..28331
DNA (1476bp) protein (492aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EBQ0_METMS
hypothetical protein
Tax=CG_Solirubrobact_01
Displaying 29 items

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