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S3-16-all-fractions_k255_6185739

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Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-16-all-fractions_k255_6185739_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1..366)
DNA (366bp) protein (122aa)
Transcriptional regulator, ArsR family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICE2_NITGG
arsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AFU57230.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_6185739_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(370..780)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7K7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57231.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_6185739_3
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1138..2142)
DNA (1005bp) protein (335aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF85500.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
S3-16-all-fractions_k255_6185739_4
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2428..3066
DNA (639bp) protein (213aa)
exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AIC15654.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
S3-16-all-fractions_k255_6185739_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3659..6658)
DNA (3000bp) protein (1000aa)
Copper resistance family protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHG1_NITGG
Copper resistance family protein {ECO:0000313|EMBL:AFU57232.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
copper resistance family protein
S3-16-all-fractions_k255_6185739_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6759..7478
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILQ5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57234.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_6185739_7
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7475..8011)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICE6_NITGG
exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AIC15676.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
S3-16-all-fractions_k255_6185739_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8017..8535)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7L1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57236.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_6185739_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8767..9702
DNA (936bp) protein (312aa)
ABC uptake transporter, putative heme-binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEN3_NITGG
ABC uptake transporter, heme-binding protein
ABC uptake transporter, putative heme-binding protein {ECO:0000313|EMBL:AFU57238.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_6185739_10
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9691..10002)
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0ILQ7_NITGG
SSU ribosomal protein S10P
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
S3-16-all-fractions_k255_6185739_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10021..11382)
DNA (1362bp) protein (454aa)
Elongation factor 1-alpha n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICE8_NITGG
tuf; elongation factor 1-alpha
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_6185739_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11502..12692
DNA (1191bp) protein (397aa)
fbp; bifunctional fructose-1,6-bisphosphatase (EC:3.1.3.11)
Bifunctional fructose-1,6-bisphosphatase {ECO:0000313|EMBL:AFU57241.1}; EC=3.1.3.11 {ECO:0000313|EMBL:AFU57241.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Bifunctional fructose-1,6-bisphosphatase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7L4_NITGG
S3-16-all-fractions_k255_6185739_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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12689..13351
DNA (663bp) protein (221aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Triosephosphate isomerase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHG7_NITGG
S3-16-all-fractions_k255_6185739_14
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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comp(13379..14299)
DNA (921bp) protein (307aa)
lipoic acid synthetase (EC:2.8.1.8)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-B05 RepID=UPI0003690C27
Tax=RBG_16_KB1_OP1_55_9_curated
S3-16-all-fractions_k255_6185739_15

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14375..15439
DNA (1065bp) protein (355aa)
Probable aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=1455989 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_115_G03.;"
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003630583
gcvT; glycine cleavage system aminomethyltransferase T
S3-16-all-fractions_k255_6185739_16

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15549..15926
DNA (378bp) protein (126aa)
Glycine cleavage system H protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZ41_THERP
Probable glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1456088 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_197_F10.;"
gcvH; glycine cleavage system H protein
S3-16-all-fractions_k255_6185739_17

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15942..17201
DNA (1260bp) protein (420aa)
Glycine dehydrogenase subunit 1 (GcvPA) {ECO:0000313|EMBL:AIF19519.1}; EC=1.4.4.2 {ECO:0000313|EMBL:AIF19519.1};; TaxID=1456325 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_87_A02.;"
Putative glycine cleavage system P-protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW93I24 RepID=B3T2Y7_9ARCH
glycine dehydrogenase
S3-16-all-fractions_k255_6185739_18
uncultured marine crenarchaeote HF4000_ANIW93I24, Nitrosopumilales, Thaumarchaeota, Archaea

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17170..18669
DNA (1500bp) protein (500aa)
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Putative glycine cleavage system P-protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW93I24 RepID=B3T2Y8_9ARCH
Putative glycine cleavage system P-protein {ECO:0000313|EMBL:ABZ06947.1}; TaxID=455565 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000_ANIW93I24.;"
S3-16-all-fractions_k255_6185739_19
uncultured marine crenarchaeote HF4000_ANIW93I24, Nitrosopumilales, Thaumarchaeota, Archaea

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18653..18928
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW93I24 RepID=B3T2Y9_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ06948.1}; TaxID=455565 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000_ANIW93I24.;"
S3-16-all-fractions_k255_6185739_20

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18930..19670
DNA (741bp) protein (247aa)
Lipoate--protein ligase (LplA) {ECO:0000313|EMBL:AIF06950.1}; EC=2.7.7.63 {ECO:0000313|EMBL:AIF06950.1};; TaxID=1456088 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_197_F10.;"
lipoate-protein ligase A (EC:2.7.7.63)
Putative biotin/lipoate A/B protein ligase family protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW93I24 RepID=B3T2Z0_9ARCH
S3-16-all-fractions_k255_6185739_21

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19708..21042
DNA (1335bp) protein (445aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1456325 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_87_A02.;"
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Putative Pyridine nucleotide-disulphide oxidoreductase n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW93I24 RepID=B3T2Z1_9ARCH
S3-16-all-fractions_k255_6185739_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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21174..23861
DNA (2688bp) protein (896aa)
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:AFU57376.1}; EC=2.7.9.1 {ECO:0000313|EMBL:AFU57376.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
ppdK; pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7Y1_NITGG
S3-16-all-fractions_k255_6185739_23
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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23905..24072
DNA (168bp) protein (56aa)
DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger) (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit RPC10 (Contains C4-type Zn-finger) {ECO:0000313|EMBL:AIF84902.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AIF84902.1};; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
DNA-directed RNA polymerase, subunit P n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICM2_NITGG
S3-16-all-fractions_k255_6185739_24
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(24085..24273)
DNA (189bp) protein (63aa)
C2H2 Zn finger protein n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RUM7_CENSY
Zinc finger protein 33b (modular protein)
Zinc finger protein 33b (Modular protein) {ECO:0000313|EMBL:AIC15694.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
S3-16-all-fractions_k255_6185739_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(24291..24737)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILV1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57374.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_6185739_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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24917..26545
DNA (1629bp) protein (543aa)
nirK; copper-containig nitrite reductase (EC:1.7.2.1)
Putative copper-containig nitrite reductase {ECO:0000313|EMBL:AFU57373.1}; EC=1.7.2.1 {ECO:0000313|EMBL:AFU57373.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative copper-containig nitrite reductase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEZ7_NITGG
S3-16-all-fractions_k255_6185739_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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26630..27028
DNA (399bp) protein (133aa)
Putative nitrogen regulatory protein P-II n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHR2_NITGG
nitrogen regulatory protein P-II
Putative nitrogen regulatory protein P-II {ECO:0000313|EMBL:AFU57372.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_6185739_28
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(27043..27168)
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EHV8_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15697.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
S3-16-all-fractions_k255_6185739_29
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(27502..27846)
DNA (345bp) protein (115aa)
Putative nitrogen regulatory protein P-II n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILU1_NITGG
nitrogen regulatory protein P-II
Putative nitrogen regulatory protein P-II {ECO:0000313|EMBL:AFU57349.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_6185739_30
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(27935..28498)
DNA (564bp) protein (188aa)
Zinc finger C2H2 type domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEX5_NITGG
zinc finger C2H2 type domain-containing protein
Zinc finger C2H2 type domain-containing protein {ECO:0000313|EMBL:AFU57348.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying items 1-30 of 68 in total

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