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S3-16-all-fractions_k255_271537_17

Organism: S3-16-all-fractions_metab_conc_57

near complete RP 29 / 55 MC: 1 BSCG 17 / 51 MC: 2 ASCG 37 / 38
Location: comp(16211..16762)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 184.0
  • Bit_score: 257
  • Evalue 1.10e-65
Putative 2'-5' RNA ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID41_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 184.0
  • Bit_score: 257
  • Evalue 8.10e-66
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 184.0
  • Bit_score: 257
  • Evalue 2.30e-66

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Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 552
ATGCGTGTCTTTATCGCAGTGGACATTTCAAGCAACGCACTAGCTAAGCTGCAAAAGGAAATACTGTCTACAACAGGATGGGATCCTGGGCATGTCAAGCCTGTCGAGCCTCACAATTTTCATTTCACGCTAATTTTTCTTGGGGAAATAAGTGATCATGATGTTGATAGGATTAAAGAAATGTTGGCAGGATTTTCATTTGAACCATTTACAATCACCTACAGCGAAATTGGCGCCTTTCCCAAGCCTGAACATGCCAGGGTAGTCTGGGTAGGTGTTGACTCGGAGGGCGCTCAAAAATTAACTGGCCTTGCAAATGATGTTGTAGCAAAGATGTCCGAGCTGGGCTTTAAGGCGGACAAGCCTTTTTCAACCCATATGACATTACTTCGGAGCAAGGGCAGACCGGTCAGCGCAAGCTACATCTCTTCAAAATATCAAGGGCAAACATTTGGATCTGACTGGATAGATAAAGTGCATCTTAAGAAAAGTGAGCTTACGCCATCAGGCCCCAAATACTCGAATGTTTATACTGTAGAAGCTAAAAAATGA
PROTEIN sequence
Length: 184
MRVFIAVDISSNALAKLQKEILSTTGWDPGHVKPVEPHNFHFTLIFLGEISDHDVDRIKEMLAGFSFEPFTITYSEIGAFPKPEHARVVWVGVDSEGAQKLTGLANDVVAKMSELGFKADKPFSTHMTLLRSKGRPVSASYISSKYQGQTFGSDWIDKVHLKKSELTPSGPKYSNVYTVEAKK*