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S3-16-all-fractions_k255_271537

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-16-all-fractions_k255_271537_1
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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1..699
DNA (699bp) protein (233aa)
hypothetical protein id=5095172 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Uncharacterized protein {ECO:0000313|EMBL:KKP36830.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
hypothetical protein
S3-16-all-fractions_k255_271537_2
unknown

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comp(666..842)
DNA (177bp) protein (59aa)

This feature has no annotations

S3-16-all-fractions_k255_271537_3
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(953..2350)
DNA (1398bp) protein (466aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQG1_9ARCH
NAD dependent epimerase/dehydratase family protein
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:AJW70662.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;"
S3-16-all-fractions_k255_271537_4

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comp(2500..2967)
DNA (468bp) protein (156aa)
Uncharacterized protein {ECO:0000313|EMBL:AIF08062.1}; TaxID=1456108 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_26_F01.;"
S3-16-all-fractions_k255_271537_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4204..4458)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF57_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58420.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_271537_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5260..6042)
DNA (783bp) protein (261aa)
ABC efflux transporter, permease protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFI7_NITGG
ABC efflux transporter permease
ABC efflux transporter, permease protein {ECO:0000313|EMBL:AFU57593.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_271537_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6026..6970)
DNA (945bp) protein (315aa)
ABC efflux transporter, ATP-binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II07_NITGG
ABC efflux transporter, ATP-binding protein
ABC efflux transporter, ATP-binding protein {ECO:0000313|EMBL:AFU57592.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_271537_8
unknown

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6985..7320
DNA (336bp) protein (112aa)

This feature has no annotations

S3-16-all-fractions_k255_271537_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7262..7669)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID51_NITGG
hypothetical protein
UPF0201 protein NTE_03058 {ECO:0000256|HAMAP-Rule:MF_01112}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
S3-16-all-fractions_k255_271537_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7666..8214)
DNA (549bp) protein (183aa)
Putative dephospho-CoA kinase, CoaE n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM61_NITGG
dephospho-CoA kinase, CoaE
Putative dephospho-CoA kinase, CoaE {ECO:0000313|EMBL:AFU57589.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_271537_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8269..9159)
DNA (891bp) protein (297aa)
Putative rhodanese sulfurtransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFI1_NITGG
rhodanese sulfurtransferase
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_271537_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9147..11099)
DNA (1953bp) protein (651aa)
Ferredoxin-sulfite/nitrite reductase {ECO:0000313|EMBL:AFU57587.1}; EC=1.7.7.1 {ECO:0000313|EMBL:AFU57587.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
sir1; ferredoxin-sulfite/nitrite reductase (EC:1.7.7.1)
Ferredoxin-sulfite/nitrite reductase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II05_NITGG
S3-16-all-fractions_k255_271537_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11763..12512
DNA (750bp) protein (250aa)
50S ribosomal protein L2 n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0ID46_NITGG
rpl2p; 50S ribosomal protein L2p
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_271537_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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12596..13108
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM59_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57584.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_271537_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(14111..14878)
DNA (768bp) protein (256aa)
Putative Ser/Thr protein kinase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II03_NITGG
Ser/Thr protein kinase
Putative Ser/Thr protein kinase {ECO:0000313|EMBL:AFU57582.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_271537_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(14844..16196)
DNA (1353bp) protein (451aa)
cca; CCA-adding enzyme (EC:2.7.7.72)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA adenylyl-/cytidylyl- transferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA-NT {ECO:0000256|HAMAP-Rule:MF_01264}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
CCA-adding enzyme n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8H8_NITGG
S3-16-all-fractions_k255_271537_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(16211..16762)
DNA (552bp) protein (184aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative 2'-5' RNA ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID41_NITGG
2'-5' RNA ligase
S3-16-all-fractions_k255_271537_18
unknown

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comp(16788..16919)
DNA (132bp) protein (44aa)

This feature has no annotations

S3-16-all-fractions_k255_271537_19
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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17275..17661
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID31_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16792.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
S3-16-all-fractions_k255_271537_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(17652..18749)
DNA (1098bp) protein (366aa)
dys2; deoxyhypusine synthase (EC:2.5.1.46)
Deoxyhypusine synthase {ECO:0000313|EMBL:AFU57569.1}; EC=2.5.1.46 {ECO:0000313|EMBL:AFU57569.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Deoxyhypusine synthase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM54_NITGG
S3-16-all-fractions_k255_271537_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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19102..20079
DNA (978bp) protein (326aa)
dys1; deoxyhypusine synthase (EC:2.5.1.46)
Deoxyhypusine synthase {ECO:0000313|EMBL:AFU57566.1}; EC=2.5.1.46 {ECO:0000313|EMBL:AFU57566.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Deoxyhypusine synthase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8G5_NITGG
S3-16-all-fractions_k255_271537_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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20345..20947
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM43_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57544.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_271537_23
unknown

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comp(21151..21366)
DNA (216bp) protein (72aa)

This feature has no annotations

S3-16-all-fractions_k255_271537_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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21440..22162
DNA (723bp) protein (241aa)
Putative transcriptional regulator n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8E1_NITGG
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AFU57546.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying 24 items

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