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S3-16-all-fractions_k255_250717

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-16-all-fractions_k255_250717_1
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(1..288)
DNA (288bp) protein (96aa)
30S ribosomal protein S7 n=1 Tax=Nocardioides sp. CF8 RepID=R7Y0J3_9ACTO
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
30S ribosomal protein S7
S3-16-all-fractions_k255_250717_2
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(288..659)
DNA (372bp) protein (124aa)
30S ribosomal protein S12 n=1 Tax=Nocardioides sp. CF8 RepID=R7Y0N4_9ACTO
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
rpsL; 30S ribosomal protein S12
S3-16-all-fractions_k255_250717_3
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(852..2069)
DNA (1218bp) protein (406aa)
Major facilitator transporter n=1 Tax=Nocardioides sp. CF8 RepID=R7Y1K4_9ACTO
Major facilitator transporter {ECO:0000313|EMBL:EON25135.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
MFS transporter
S3-16-all-fractions_k255_250717_4
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2176..2631)
DNA (456bp) protein (152aa)
Transcriptional regulator, MarR family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SNP0_NOCSJ
regulatory protein MarR
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABL83425.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S3-16-all-fractions_k255_250717_5
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2801..4261)
DNA (1461bp) protein (487aa)
Xanthine/uracil/vitamin C permease n=1 Tax=Nocardioides sp. CF8 RepID=R7Y0R7_9ACTO
Xanthine/uracil/vitamin C permease {ECO:0000313|EMBL:EON25133.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
xanthine/uracil/vitamin C permease
S3-16-all-fractions_k255_250717_6
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4332..4622
DNA (291bp) protein (97aa)
Integral membrane protein n=1 Tax=Nocardioides sp. CF8 RepID=R7Y0I8_9ACTO
Integral membrane protein {ECO:0000313|EMBL:EON25132.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
integral membrane protein
S3-16-all-fractions_k255_250717_7
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4619..5218
DNA (600bp) protein (200aa)
Methyltransferase type 12 n=1 Tax=Nocardioides sp. CF8 RepID=R7Y0M9_9ACTO
Methyltransferase type 12 {ECO:0000313|EMBL:EON25131.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
type 12 methyltransferase
S3-16-all-fractions_k255_250717_8
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5253..6047)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7Y1J9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON25130.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_250717_9
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6138..7574
DNA (1437bp) protein (479aa)
Major facilitator transporter n=1 Tax=Nocardioides sp. CF8 RepID=R7Y0K9_9ACTO
Major facilitator transporter {ECO:0000313|EMBL:EON25129.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
major facilitator transporter
S3-16-all-fractions_k255_250717_10
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7578..7973)
DNA (396bp) protein (132aa)
Cold-shock DNA-binding protein family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SNP5_NOCSJ
cold-shock DNA-binding protein family protein
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ABL83430.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S3-16-all-fractions_k255_250717_11
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8174..10279
DNA (2106bp) protein (702aa)
Peptidase S8 and S53, subtilisin, kexin n=1 Tax=Nocardioides sp. CF8 RepID=R7Y0M4_9ACTO
Peptidase S8 and S53, subtilisin, kexin {ECO:0000313|EMBL:EON25126.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
cell wall-binding protein
S3-16-all-fractions_k255_250717_12
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

10385..11017
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI0003671737
hypothetical protein
Tax=RBG_16_Chloroflexi_57_11_curated
S3-16-all-fractions_k255_250717_13
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11100..11609
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00035C4F7C
RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:CCH15877.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
RNA polymerase sigma-70 factor
S3-16-all-fractions_k255_250717_14
unknown

Not on your lists

11606..12454
DNA (849bp) protein (283aa)

This feature has no annotations

S3-16-all-fractions_k255_250717_15
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12512..13882)
DNA (1371bp) protein (457aa)
Putative MFS transporter n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H3L4_ACTM4
putative MFS transporter
Putative MFS transporter {ECO:0000313|EMBL:BAL87601.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
S3-16-all-fractions_k255_250717_16
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13958..14728)
DNA (771bp) protein (257aa)
bdhA; D-beta-hydroxybutyrate dehydrogenase (EC:1.1.1.30)
D-beta-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:CCH90601.1}; EC=1.1.1.30 {ECO:0000313|EMBL:CCH90601.1};; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
D-beta-hydroxybutyrate dehydrogenase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F4N8_MODMB
S3-16-all-fractions_k255_250717_17
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14823..16658)
DNA (1836bp) protein (612aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037B72ED
GAF domain-containing protein
GAF domain protein {ECO:0000313|EMBL:AAZ54118.1}; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
S3-16-all-fractions_k255_250717_18
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16681..17784)
DNA (1104bp) protein (368aa)
RDD domain containing protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SNQ2_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY16456.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
S3-16-all-fractions_k255_250717_19
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17799..18905)
DNA (1107bp) protein (369aa)
Forkhead-associated protein n=1 Tax=Nocardioides sp. CF8 RepID=R7Y198_9ACTO
Forkhead-associated protein {ECO:0000313|EMBL:EON25298.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
forkhead-associated protein
S3-16-all-fractions_k255_250717_20
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18902..19717)
DNA (816bp) protein (272aa)
Protein phosphatase 2C domain-containing n=1 Tax=Nocardioides sp. CF8 RepID=R7Y119_9ACTO
Protein phosphatase 2C domain-containing {ECO:0000313|EMBL:EON25297.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
protein phosphatase 2C domain-containing protein
S3-16-all-fractions_k255_250717_21
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19862..21091
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SNQ7_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL83442.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S3-16-all-fractions_k255_250717_22
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21098..22054
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7Y236_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON25295.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_250717_23
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22131..22658
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7Y141_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON25294.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_250717_24
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22686..24335
DNA (1650bp) protein (550aa)
Helicase domain-containing protein n=1 Tax=Nocardioides sp. CF8 RepID=R7Y193_9ACTO
Helicase domain-containing protein {ECO:0000313|EMBL:EON25293.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
helicase domain-containing protein
S3-16-all-fractions_k255_250717_25
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24342..25382)
DNA (1041bp) protein (347aa)
NADP-dependent alcohol dehydrogenase (EC:1.1.1.2)
zinc-binding dehydrogenase n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00035EFF82
NADP-dependent alcohol dehydrogenase {ECO:0000313|EMBL:EKT76722.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
S3-16-all-fractions_k255_250717_26
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25444..25890)
DNA (447bp) protein (149aa)
regulatory protein n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B58126
regulatory protein
MerR family transcriptional regulator {ECO:0000313|EMBL:EMY36194.1}; TaxID=1246476 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
S3-16-all-fractions_k255_250717_27
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25894..26883
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SNR4_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL83449.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S3-16-all-fractions_k255_250717_28
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26880..27464
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7Y116_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:AIY19753.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein
S3-16-all-fractions_k255_250717_29
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27468..28190)
DNA (723bp) protein (241aa)
GntR family transcriptional regulator n=1 Tax=Nocardioides sp. CF8 RepID=R7Y161_9ACTO
GntR family transcriptional regulator {ECO:0000313|EMBL:EON25291.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
GntR family transcriptional regulator
S3-16-all-fractions_k255_250717_30
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28306..28929
DNA (624bp) protein (208aa)
DNA-N1-methyladenine dioxygenase n=1 Tax=Nocardioides sp. CF8 RepID=R7Y189_9ACTO
DNA-N1-methyladenine dioxygenase {ECO:0000313|EMBL:EON25288.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
DNA repair protein
Displaying items 1-30 of 37 in total

View Taxonomy