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S3-16-all-fractions_k255_1944272

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-16-all-fractions_k255_1944272_1
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(2..727)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036C1ED6
hypothetical protein
Tax=CG_Anaero_02
S3-16-all-fractions_k255_1944272_2
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(737..1648)
DNA (912bp) protein (304aa)
GCN5-related N-acetyltransferase n=1 Tax=Nocardioides sp. CF8 RepID=R7Y0Q9_9ACTO
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EON24820.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
N-acetyltransferase GCN5
S3-16-all-fractions_k255_1944272_3
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


1726..4359
DNA (2634bp) protein (878aa)
Valine--tRNA ligase {ECO:0000256|SAAS:SAAS00105779}; EC=6.1.1.9 {ECO:0000256|SAAS:SAAS00105779};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Nocardioides sp. CF8 RepID=R7XZR4_9ACTO
S3-16-all-fractions_k255_1944272_4
Eimeria necatrix, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

comp(4384..5025)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Eimeria necatrix RepID=U6ME88_9EIME
Uncharacterized protein {ECO:0000313|EMBL:CDJ62341.1}; TaxID=51315 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria necatrix.;"
tolA; membrane protein
S3-16-all-fractions_k255_1944272_5
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5157..6437)
DNA (1281bp) protein (427aa)
clpX; ATP-dependent protease ATP-binding subunit ClpX (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Nocardioides sp. CF8 RepID=R7XZN4_9ACTO
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
S3-16-all-fractions_k255_1944272_6
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6572..7180)
DNA (609bp) protein (203aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
ClpP2 peptidase (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Nocardioides sp. CF8 RepID=R7XZS9_9ACTO
S3-16-all-fractions_k255_1944272_7
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7184..7912)
DNA (729bp) protein (243aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
ClpP1 peptidase (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Nocardioides sp. CF8 RepID=R7Y0Q6_9ACTO
S3-16-all-fractions_k255_1944272_8
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8011..9444)
DNA (1434bp) protein (478aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Trigger factor n=1 Tax=Nocardioides sp. CF8 RepID=R7XZX4_9ACTO
trigger factor
S3-16-all-fractions_k255_1944272_9
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9807..10895)
DNA (1089bp) protein (363aa)
Stage II sporulation E family protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XZN0_9ACTO
Stage II sporulation E family protein {ECO:0000313|EMBL:EON24812.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
stage II sporulation E family protein
S3-16-all-fractions_k255_1944272_10
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10892..11791)
DNA (900bp) protein (300aa)
Formamidopyrimidine-DNA glycolase n=1 Tax=Nocardioides sp. CF8 RepID=R7XZS4_9ACTO
Formamidopyrimidine-DNA glycolase {ECO:0000313|EMBL:EON24811.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
DNA glycosylase
S3-16-all-fractions_k255_1944272_11
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11784..12317)
DNA (534bp) protein (178aa)
ribose-5-phosphate isomerase B (EC:5.3.1.6)
Ribose 5-phosphate isomerase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SME8_NOCSJ
Ribose 5-phosphate isomerase {ECO:0000313|EMBL:ABL82983.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S3-16-all-fractions_k255_1944272_12
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12378..13268)
DNA (891bp) protein (297aa)
Alpha/beta hydrolase domain-containing protein n=1 Tax=Nocardioides sp. CF8 RepID=R7Y045_9ACTO
Alpha/beta hydrolase domain-containing protein {ECO:0000313|EMBL:EON24893.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
alpha/beta hydrolase domain-containing protein
S3-16-all-fractions_k255_1944272_13
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13282..13875)
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UU39_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJR11195.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
hypothetical protein
S3-16-all-fractions_k255_1944272_14
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(13885..15696)
DNA (1812bp) protein (604aa)
Methionine--tRNA ligase {ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|SAAS:SAAS00001323};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionyl-tRNA synthetase n=1 Tax=Nocardioides sp. CF8 RepID=R7XZZ9_9ACTO
S3-16-all-fractions_k255_1944272_15
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15775..16374)
DNA (600bp) protein (200aa)
DsbA oxidoreductase n=1 Tax=Nocardioides sp. CF8 RepID=R7Y0W5_9ACTO
DsbA oxidoreductase {ECO:0000313|EMBL:EON24890.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
DSBA oxidoreductase
S3-16-all-fractions_k255_1944272_16
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16464..19019
DNA (2556bp) protein (852aa)
Aminopeptidase N n=1 Tax=Nocardioides sp. CF8 RepID=R7XZX8_9ACTO
Aminopeptidase N {ECO:0000313|EMBL:EON24889.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
aminopeptidase N
S3-16-all-fractions_k255_1944272_17
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19043..19426)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7Y040_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON24888.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_1944272_18
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19413..19838)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XZU3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON24887.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_1944272_19
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19870..20901
DNA (1032bp) protein (344aa)
MscS mechanosensitive ion channel n=1 Tax=Nocardioides sp. CF8 RepID=R7XZZ4_9ACTO
MscS mechanosensitive ion channel {ECO:0000313|EMBL:EON24886.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
mechanosensitive ion channel MscS
Displaying 19 items

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