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S3-16-all-fractions_k255_2009955

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-16-all-fractions_k255_2009955_1
unknown

Not on your lists

2..109
DNA (108bp) protein (36aa)

This feature has no annotations

S3-16-all-fractions_k255_2009955_2
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

125..1003
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XSG8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON22274.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_2009955_3
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1000..1689)
DNA (690bp) protein (230aa)
Aspartate racemase n=1 Tax=Nocardioides sp. CF8 RepID=R7XTM9_9ACTO
Aspartate racemase {ECO:0000313|EMBL:EON22712.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
aspartate racemase
S3-16-all-fractions_k255_2009955_4
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1710..2477)
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SP14_NOCSJ
oxidoreductase
Short chain dehydrogenase {ECO:0000313|EMBL:AIY18799.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
S3-16-all-fractions_k255_2009955_5
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2520..3266
DNA (747bp) protein (249aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
rnhA; ribonuclease HI (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Nocardioides sp. CF8 RepID=R7XTU2_9ACTO
S3-16-all-fractions_k255_2009955_6
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3283..3681
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SP13_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL83548.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S3-16-all-fractions_k255_2009955_7
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3774..5030
DNA (1257bp) protein (419aa)
D-inositol-3-phosphate glycosyltransferase {ECO:0000256|HAMAP-Rule:MF_01695, ECO:0000256|SAAS:SAAS00011422}; EC=2.4.1.250 {ECO:0000256|HAMAP-Rule:MF_01695, ECO:0000256|SAAS:SAAS00011422};; N-acetylglucosamine-inositol-phosphate N-acetylglucosaminyltransferase {ECO:0000256|HAMAP-Rule:MF_01695}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
D-inositol-3-phosphate glycosyltransferase n=1 Tax=Nocardioides sp. CF8 RepID=R7XTP2_9ACTO
group 1 glycosyl transferase
S3-16-all-fractions_k255_2009955_8
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5027..5548
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XTR7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON22708.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_2009955_9
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5580..6413)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037A0B64
Multidrug transporter {ECO:0000313|EMBL:KJK10195.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
multidrug transporter
S3-16-all-fractions_k255_2009955_10
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6576..7253)
DNA (678bp) protein (226aa)
Response regulator receiver n=1 Tax=Nocardioides sp. CF8 RepID=R7XUL6_9ACTO
Response regulator receiver {ECO:0000313|EMBL:EON22705.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
response regulator receiver
S3-16-all-fractions_k255_2009955_11
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7250..8404)
DNA (1155bp) protein (385aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
ATPase domain-containing protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XTN7_9ACTO
histidine kinase
S3-16-all-fractions_k255_2009955_12
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8587..9237
DNA (651bp) protein (217aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Nocardioides sp. CF8 RepID=R7XTR2_9ACTO
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
PhoU family transcriptional regulator
S3-16-all-fractions_k255_2009955_13
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9257..13645)
DNA (4389bp) protein (1463aa)
Transcriptional regulator, SARP family n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SDT3_INTC7
Uncharacterized protein {ECO:0000313|EMBL:KGN42702.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
SARP family transcriptional regulator
S3-16-all-fractions_k255_2009955_14
unknown

Not on your lists

13721..14035
DNA (315bp) protein (105aa)

This feature has no annotations

S3-16-all-fractions_k255_2009955_15
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14050..14793)
DNA (744bp) protein (248aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
gpmA; phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Nocardioides sp. CF8 RepID=R7XTL8_9ACTO
S3-16-all-fractions_k255_2009955_16
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14790..15263)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SP04_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL83539.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S3-16-all-fractions_k255_2009955_17
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15285..15983)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XUL1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON22700.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_2009955_18
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16142..16627
DNA (486bp) protein (162aa)
Transcriptional regulator, CarD family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SP02_NOCSJ
CarD family transcriptional regulator
Transcriptional regulator, CarD family {ECO:0000313|EMBL:ABL83537.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S3-16-all-fractions_k255_2009955_19
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16741..17211
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SP01_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL83536.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S3-16-all-fractions_k255_2009955_20
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17208..17891)
DNA (684bp) protein (228aa)
4-diphosphocytidyl-2C-methyl-D-erythritol n=1 Tax=Nocardioides sp. CF8 RepID=R7XTL2_9ACTO
4-diphosphocytidyl-2C-methyl-D-erythritol {ECO:0000313|EMBL:EON22697.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
4-diphosphocytidyl-2C-methyl-D-erythritol synthase
S3-16-all-fractions_k255_2009955_21
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17891..18388)
DNA (498bp) protein (166aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Nocardioides sp. CF8 RepID=R7XTK0_9ACTO
S3-16-all-fractions_k255_2009955_22
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18450..19943
DNA (1494bp) protein (498aa)
Oxidoreductase, molybdopterin binding n=1 Tax=Nocardioides sp. CF8 RepID=R7XTR6_9ACTO
Oxidoreductase, molybdopterin binding {ECO:0000313|EMBL:EON22686.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
oxidoreductase
S3-16-all-fractions_k255_2009955_23
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19940..21151)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XTL4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON22684.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_2009955_24
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21352..23544
DNA (2193bp) protein (731aa)
Uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TNB9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EAP98027.1}; TaxID=313589 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
endonuclease/exonuclease/phosphatase
Displaying 24 items

View Taxonomy