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S3-16-all-fractions_k255_4469701

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-16-all-fractions_k255_4469701_1
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..210)
DNA (210bp) protein (70aa)
ABC transporter-like protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XSN9_9ACTO
ABC transporter-like protein {ECO:0000313|EMBL:EON22318.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
ABC transporter-like protein
S3-16-all-fractions_k255_4469701_2
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(210..1115)
DNA (906bp) protein (302aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Nocardioides sp. CF8 RepID=R7XSJ0_9ACTO
S3-16-all-fractions_k255_4469701_3
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1112..1990)
DNA (879bp) protein (293aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SNG9_NOCSJ
S3-16-all-fractions_k255_4469701_4
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2102..3241)
DNA (1140bp) protein (380aa)
Transglycosylase domain-containing protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XTK2_9ACTO
Transglycosylase domain-containing protein {ECO:0000313|EMBL:EON22315.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
transglycosylase domain-containing protein
S3-16-all-fractions_k255_4469701_5
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3529..4470)
DNA (942bp) protein (314aa)
Hydrolase, TatD family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SNH1_NOCSJ
TatD family hydrolase
Hydrolase, TatD family {ECO:0000313|EMBL:ABL83356.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S3-16-all-fractions_k255_4469701_6
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4457..5299)
DNA (843bp) protein (281aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Nocardioides sp. CF8 RepID=R7XSN7_9ACTO
uroporphyrin-III methyltransferase
S3-16-all-fractions_k255_4469701_7
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5344..6927
DNA (1584bp) protein (528aa)
Glycosyl transferase family protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XSI7_9ACTO
Glycosyl transferase family protein {ECO:0000313|EMBL:EON22312.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
glycosyl transferase family protein
S3-16-all-fractions_k255_4469701_8
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7094..7327
DNA (234bp) protein (78aa)
Leucyl-tRNA synthetase n=1 Tax=Nocardioides sp. CF8 RepID=R7Y2I5_9ACTO
Leucyl-tRNA synthetase {ECO:0000313|EMBL:EON25794.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
S3-16-all-fractions_k255_4469701_9
Plesiomonas shigelloides, Plesiomonas, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7368..8213
DNA (846bp) protein (282aa)
Acyltransferase n=1 Tax=Plesiomonas shigelloides 302-73 RepID=R8AMT8_PLESH
Acyltransferase {ECO:0000313|EMBL:EON87642.1}; TaxID=1315976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Plesiomonas.;" source="Plesiomonas shigelloides 302-73.;"
acyltransferase
Displaying 9 items

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